RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 IGHV3OR16-8A0A075B7F1 116 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 WI2-2373I1.2A0A1W2PRP0 233 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 C7orf66A4D0T2 115 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 C2orf70A6NJV1 201 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 A8MWP6 167 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 LGALS9O00182 355 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 SYNGR2O43760 224 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 CCNKO75909 580 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 PTTG1O95997 202 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 IGKV1-17P01599 117 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 MBPP02686 304 aaPredicted RBP8.67□□□□□ -1.02
SNX1-204ENST00000559061 DEFA1P59665 94 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 DEFA3P59666 94 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 DEFA6Q01524 100 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 C9orf66Q5T8R8 295 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 PLET1Q6UQ28 207 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 UBAC2Q8NBM4 344 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 TMEM190Q8WZ59 177 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 BSCL2Q96G97 398 aaPredicted RBP8.67□□□□□ -1.02
SNX1-204ENST00000559061 MCRIP2Q9BUT9 160 aaKnown RBP8.67□□□□□ -1.02
SNX1-204ENST00000559061 PALMDQ9NP74 551 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 SELENOKQ9Y6D0 94 aa8.67□□□□□ -1.02
SNX1-204ENST00000559061 IGKV1D-37A0A075B6S9 117 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 PIGBOS1A0A0B4J2F0 54 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 IZUMO1RA6ND01 250 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 SNRPGP15A8MWD9 76 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 H3BP45 60 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 K7EIL1 84 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 WRBO00258 174 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 SAP30O75446 220 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 SIX6O95475 246 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 IGLV1-51P01701 117 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 OPRK1P41145 380 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 MFAP4P55083 255 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 CD69Q07108 199 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 TM4SF20Q53R12 229 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 Q56UQ5 140 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 OR4X1Q8NH49 305 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 RNASEH2CQ8TDP1 164 aaKnown RBP8.66□□□□□ -1.02
SNX1-204ENST00000559061 TXN2Q99757 166 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 ZFAND3Q9H8U3 227 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 U3KQ87 197 aa8.66□□□□□ -1.02
SNX1-204ENST00000559061 K7EPK0 472 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 CORTO00230 105 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 CYB5BO43169 146 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 SSSCA1O60232 199 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 PRAF2O60831 178 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 CLN5O75503 358 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 IFNA10P01566 189 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 IFNA21P01568 189 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 IGLC1P0CG04 106 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 C8orf88P0DMB2 117 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 NKX2-1P43699 371 aaPredicted RBP8.65□□□□□ -1.02
SNX1-204ENST00000559061 SUB1P53999 127 aaKnown RBP eCLIP8.65□□□□□ -1.02
SNX1-204ENST00000559061 H2BFSP57053 126 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 TATDN3Q17R31 274 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 SPSB3Q6PJ21 355 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 SLC16A13Q7RTY0 426 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 UXS1Q8NBZ7 420 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 C2orf50Q96LR7 162 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 HIPK2Q9H2X6 1198 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 SIGLEC8Q9NYZ4 499 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 CACFD1Q9UGQ2 172 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 MLXQ9UH92 298 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 ALG5Q9Y673 324 aa8.65□□□□□ -1.02
SNX1-204ENST00000559061 IGKV1OR2-108A0A075B7D4 117 aa8.64□□□□□ -1.03
SNX1-204ENST00000559061 NDUFA4O00483 81 aa8.64□□□□□ -1.03
SNX1-204ENST00000559061 FOLR2P14207 255 aa8.64□□□□□ -1.03
SNX1-204ENST00000559061 RND2P52198 227 aa8.64□□□□□ -1.03
SNX1-204ENST00000559061 ARL16Q0P5N6 197 aa8.64□□□□□ -1.03
SNX1-204ENST00000559061 TIGITQ495A1 244 aa8.64□□□□□ -1.03
SNX1-204ENST00000559061 TMEM14EPQ6UXP3 125 aa8.64□□□□□ -1.03
SNX1-204ENST00000559061 TMEM116Q8NCL8 245 aa8.64□□□□□ -1.03
SNX1-204ENST00000559061 SMIM8Q96KF7 97 aa8.64□□□□□ -1.03
SNX1-204ENST00000559061 PRR25Q96S07 402 aa8.64□□□□□ -1.03
SNX1-204ENST00000559061 GSKIPQ9P0R6 139 aa8.64□□□□□ -1.03
SNX1-204ENST00000559061 FAM25EA8MYX2 175 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 H0YIZ8 118 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 GOSR2O14653 212 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 ZNF207O43670 478 aaKnown RBP8.63□□□□□ -1.03
SNX1-204ENST00000559061 GNG7O60262 68 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 MED6O75586 246 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 SCAF4O95104 1147 aaKnown RBP8.63□□□□□ -1.03
SNX1-204ENST00000559061 SCGB1D2O95969 90 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 CBLN1P23435 193 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 INSL3P51460 131 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 DCTN2Q13561 401 aaKnown RBP8.63□□□□□ -1.03
SNX1-204ENST00000559061 RAB32Q13637 225 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 GAMTQ14353 236 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 OXA1LQ15070 435 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 SPANXN5Q5MJ07 72 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 TOMM20LQ6UXN7 152 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 NPIPB3Q92617 1050 aa8.63□□□□□ -1.03
SNX1-204ENST00000559061 SORL1Q92673 2214 aa8.62□□□□□ -1.03
SNX1-204ENST00000559061 ZNF320A2RRD8 509 aa8.62□□□□□ -1.03
SNX1-204ENST00000559061 C5orf51A6NDU8 294 aa8.62□□□□□ -1.03
SNX1-204ENST00000559061 APOHP02749 345 aaPredicted RBP8.62□□□□□ -1.03
SNX1-204ENST00000559061 CXCL3P19876 107 aa8.62□□□□□ -1.03
SNX1-204ENST00000559061 ATP5IP56385 69 aaPredicted RBP8.62□□□□□ -1.03
SNX1-204ENST00000559061 DEFB114Q30KQ6 69 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms