RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 RSL24D1Q9UHA3 163 aaKnown RBP12.61□□□□□ -0.39
LRRC28-210ENST00000558879 TP53TG1Q9Y2A0 90 aa12.61□□□□□ -0.39
LRRC28-210ENST00000558879 AGRNO00468 2067 aa12.6□□□□□ -0.39
LRRC28-210ENST00000558879 TRAV14DV4A0A0A6YYC5 116 aa12.6□□□□□ -0.39
LRRC28-210ENST00000558879 NOL3O60936 208 aaKnown RBP12.6□□□□□ -0.39
LRRC28-210ENST00000558879 YIF1AO95070 293 aa12.6□□□□□ -0.39
LRRC28-210ENST00000558879 TMEM50AO95807 157 aa12.6□□□□□ -0.39
LRRC28-210ENST00000558879 TNFSF8P32971 234 aa12.6□□□□□ -0.39
LRRC28-210ENST00000558879 SUB1P53999 127 aaKnown RBP eCLIP12.6□□□□□ -0.39
LRRC28-210ENST00000558879 SPCS3P61009 180 aa12.6□□□□□ -0.39
LRRC28-210ENST00000558879 GINS3Q9BRX5 216 aa12.6□□□□□ -0.39
LRRC28-210ENST00000558879 CACNG5Q9UF02 275 aa12.6□□□□□ -0.39
LRRC28-210ENST00000558879 TMEM56-RWDD3S4R434 201 aa12.6□□□□□ -0.39
LRRC28-210ENST00000558879 IGHV3-49A0A0A0MS15 119 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 KIR2DL5BA0A0G2JN68 375 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 KIR2DL5BA0A0G2JPC4 375 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 CLN5O75503 358 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 APOC4P55056 127 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 TMEM268Q5VZI3 342 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 Q6ZWC4 215 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 KIR2DL5AQ8N109 375 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 KIR2DL5BQ8NHK3 375 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 IL17DQ8TAD2 202 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 IL22RA2Q969J5 263 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 TRIM63Q969Q1 353 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 GPR146Q96CH1 333 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 ENY2Q9NPA8 101 aa12.59□□□□□ -0.39
LRRC28-210ENST00000558879 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.59□□□□□ -0.39
LRRC28-210ENST00000558879 PUS1Q9Y606 427 aaKnown RBP eCLIP12.59□□□□□ -0.39
LRRC28-210ENST00000558879 A0A1B0GU03 582 aa12.58□□□□□ -0.4
LRRC28-210ENST00000558879 OPRK1P41145 380 aa12.58□□□□□ -0.4
LRRC28-210ENST00000558879 TMEM187Q14656 261 aa12.58□□□□□ -0.4
LRRC28-210ENST00000558879 OR4X1Q8NH49 305 aa12.58□□□□□ -0.4
LRRC28-210ENST00000558879 MCFD2Q8NI22 146 aa12.58□□□□□ -0.4
LRRC28-210ENST00000558879 ST8SIA2Q92186 375 aa12.58□□□□□ -0.4
LRRC28-210ENST00000558879 SCP2D1Q9UJQ7 156 aa12.58□□□□□ -0.4
LRRC28-210ENST00000558879 IGHV3OR16-13A0A075B7E8 117 aa12.57□□□□□ -0.4
LRRC28-210ENST00000558879 IGHV3-74A0A0B4J1X5 117 aa12.57□□□□□ -0.4
LRRC28-210ENST00000558879 UBE2CO00762 179 aa12.57□□□□□ -0.4
LRRC28-210ENST00000558879 APOHP02749 345 aaPredicted RBP12.57□□□□□ -0.4
LRRC28-210ENST00000558879 HTR2BP41595 481 aa12.57□□□□□ -0.4
LRRC28-210ENST00000558879 SUPT4H1P63272 117 aaKnown RBP12.57□□□□□ -0.4
LRRC28-210ENST00000558879 DEFB135Q30KP9 77 aa12.57□□□□□ -0.4
LRRC28-210ENST00000558879 C2orf83Q53S99 150 aa12.57□□□□□ -0.4
LRRC28-210ENST00000558879 MAP6D1Q9H9H5 199 aa12.57□□□□□ -0.4
LRRC28-210ENST00000558879 FABP12A6NFH5 140 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 IGKV1-17P01599 117 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 CD5P06127 495 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 BMI1P35226 326 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 KLF9Q13886 244 aaPredicted RBP12.56□□□□□ -0.4
LRRC28-210ENST00000558879 MLANAQ16655 118 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 NMSQ5H8A3 153 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 TCF24Q7RTU0 167 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 LILRB2Q8N423 598 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 SLC24A4Q8NFF2 622 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 TMEM170AQ8WVE7 144 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 PRR13Q9NZ81 148 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 V9GYH0 126 aa12.56□□□□□ -0.4
LRRC28-210ENST00000558879 TRAV2A0A0B4J234 112 aa12.55□□□□□ -0.4
LRRC28-210ENST00000558879 ZNF79Q15937 498 aa12.55□□□□□ -0.4
LRRC28-210ENST00000558879 ZNF124Q15973 351 aa12.55□□□□□ -0.4
LRRC28-210ENST00000558879 APRG1Q8IVJ8 170 aa12.55□□□□□ -0.4
LRRC28-210ENST00000558879 RNF183Q96D59 192 aa12.55□□□□□ -0.4
LRRC28-210ENST00000558879 SCGB3A2Q96PL1 93 aa12.55□□□□□ -0.4
LRRC28-210ENST00000558879 RBM38Q9H0Z9 239 aaKnown RBP12.55□□□□□ -0.4
LRRC28-210ENST00000558879 DNAH1Q9P2D7 4330 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 IGKV3-7A0A075B6H7 116 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 A0A0B4J2A0 478 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 RPS10-NUDT3A0A1W2PQS6 291 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 SPRY2O43597 315 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 IGLC1P0CG04 106 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 SULT1A3P0DMM9 295 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 SULT1A4P0DMN0 295 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 CRYBB3P26998 211 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 TFPI2P48307 235 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 CMC4P56277 68 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-210ENST00000558879 TNFRSF9Q07011 255 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 RNASEH2CQ8TDP1 164 aaKnown RBP12.54□□□□□ -0.4
LRRC28-210ENST00000558879 HEYLQ9NQ87 328 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-210ENST00000558879 MCUBQ9NWR8 336 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 CACFD1Q9UGQ2 172 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 SHPKQ9UHJ6 478 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 KCNIP3Q9Y2W7 256 aa12.54□□□□□ -0.4
LRRC28-210ENST00000558879 HYDINQ4G0P3 5121 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 ALMS1Q8TCU4 4167 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 TRAV30A0A087WSZ9 112 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 SCGB2A1O75556 95 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 SLC25A4P12235 298 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 RPL35AP18077 110 aaKnown RBP12.53□□□□□ -0.4
LRRC28-210ENST00000558879 NPY1RP25929 384 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 PRSS54Q6PEW0 395 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 LYG2Q86SG7 212 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 GBGT1Q8N5D6 347 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 STPG3Q8N7X2 389 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 MS4A6AQ9H2W1 248 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 TMEM231Q9H6L2 316 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 HSPB7Q9UBY9 170 aa12.53□□□□□ -0.4
LRRC28-210ENST00000558879 A0A0J9YWU9 116 aa12.52□□□□□ -0.41
LRRC28-210ENST00000558879 CEBPZOSA8MTT3 80 aa12.52□□□□□ -0.41
LRRC28-210ENST00000558879 DFFBO76075 338 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms