RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 S100A9P06702 114 aaKnown RBP8.55□□□□□ -1.04
CUX1-217ENST00000558836 RNF224P0DH78 156 aa8.55□□□□□ -1.04
CUX1-217ENST00000558836 GALR1P47211 349 aa8.55□□□□□ -1.04
CUX1-217ENST00000558836 HLA-DRB5Q30154 266 aa8.55□□□□□ -1.04
CUX1-217ENST00000558836 PCGF1Q9BSM1 259 aa8.55□□□□□ -1.04
CUX1-217ENST00000558836 A0A087X0M5 115 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 A0A1B0GX30 115 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 BUB1B-PAK6H3BSN5 160 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 IGLV1-47P01700 117 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 RND2P52198 227 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 KLRD1Q13241 179 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 LINC01551Q86U37 167 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 ZNF596Q8TC21 504 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 MISP3Q96FF7 219 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 IGHV1-3A0A0C4DH29 117 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 FCN1O00602 326 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 TRGC1P0CF51 173 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 ASPHD1Q5U4P2 390 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 ZNF503Q96F45 646 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 CLEC7AQ9BXN2 247 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 FBXL15Q9H469 300 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 GSX1Q9H4S2 264 aaPredicted RBP8.54□□□□□ -1.04
CUX1-217ENST00000558836 KCNIP2Q9NS61 270 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 TMEM242Q9NWH2 141 aa8.54□□□□□ -1.04
CUX1-217ENST00000558836 DLL1O00548 723 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 PDE6DO43924 150 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 MOSP00540 346 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 PFN1P07737 140 aaKnown RBP8.53□□□□□ -1.04
CUX1-217ENST00000558836 PRSS8Q16651 343 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 VMA21Q3ZAQ7 101 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 C1QL4Q86Z23 238 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 VSTM2AQ8TAG5 236 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 RPEQ96AT9 228 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 RAB1BQ9H0U4 201 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 FUT9Q9Y231 359 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 USP9XQ93008 2570 aaPredicted RBP8.53□□□□□ -1.04
CUX1-217ENST00000558836 G0S2P27469 103 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 MC5RP33032 325 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 ZNF137PP52743 207 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 PRRX1P54821 245 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 MFAP2P55001 183 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 OR8B3Q8NGG8 313 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 OCC1Q8TAD7 63 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 SLC35E1Q96K37 410 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 OR8B2Q96RD0 313 aa8.53□□□□□ -1.04
CUX1-217ENST00000558836 METTL1Q9UBP6 276 aaKnown RBP8.53□□□□□ -1.04
CUX1-217ENST00000558836 IFITM10A6NMD0 228 aa8.52□□□□□ -1.04
CUX1-217ENST00000558836 FBLN7Q53RD9 439 aa8.52□□□□□ -1.04
CUX1-217ENST00000558836 OR5B12Q96R08 314 aa8.52□□□□□ -1.04
CUX1-217ENST00000558836 CTDSP1Q9GZU7 261 aa8.52□□□□□ -1.04
CUX1-217ENST00000558836 IL3RAP26951 378 aa8.52□□□□□ -1.05
CUX1-217ENST00000558836 CRYBB3P26998 211 aa8.52□□□□□ -1.05
CUX1-217ENST00000558836 SLC25A33Q9BSK2 321 aa8.52□□□□□ -1.05
CUX1-217ENST00000558836 A0A1W2PN81 502 aa8.52□□□□□ -1.05
CUX1-217ENST00000558836 PYYP10082 97 aa8.52□□□□□ -1.05
CUX1-217ENST00000558836 PLGLAQ15195 96 aa8.52□□□□□ -1.05
CUX1-217ENST00000558836 C8orf31Q8N9H6 132 aa8.52□□□□□ -1.05
CUX1-217ENST00000558836 CBLN4Q9NTU7 201 aa8.52□□□□□ -1.05
CUX1-217ENST00000558836 IGLC7A0M8Q6 106 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 TIMM23O14925 209 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 SUMO1P63165 101 aaKnown RBP8.51□□□□□ -1.05
CUX1-217ENST00000558836 OR5I1Q13606 314 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 CYB5R2Q6BCY4 276 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 FAM103A1Q9BTL3 118 aaKnown RBP8.51□□□□□ -1.05
CUX1-217ENST00000558836 GPR61Q9BZJ8 451 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 MIOXQ9UGB7 285 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 SIGLEC9Q9Y336 463 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 TRBV24-1A0A075B6N3 115 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 IGKV1D-37A0A075B6S9 117 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 SLC17A3O00476 420 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 GATCO43716 136 aaKnown RBP8.51□□□□□ -1.05
CUX1-217ENST00000558836 OR5G3P0C626 314 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 ORM2P19652 201 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 LGALS7P47929 136 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 FAM71F2Q6NXP2 309 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 PPP1R27Q86WC6 154 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 OR4X1Q8NH49 305 aa8.51□□□□□ -1.05
CUX1-217ENST00000558836 F6UZH7 168 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 LIPFP07098 398 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 PRB4P10163 310 aaPredicted RBP8.5□□□□□ -1.05
CUX1-217ENST00000558836 S100PP25815 95 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 RPL27AP46776 148 aaKnown RBP8.5□□□□□ -1.05
CUX1-217ENST00000558836 TMEM249Q2WGJ8 235 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 PATE2Q6UY27 113 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 LINC00479Q96M42 142 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 UBTD1Q9HAC8 227 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 GGTLC3B5MD39 225 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 PPP5D1E7EU14 171 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 C19orf84I3L1E1 186 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 K7EN84 100 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 MT-CO2P00403 227 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 GNLYP22749 145 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 SSX2Q16385 188 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 NHLRC2Q8NBF2 726 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 OR4A5Q8NH83 315 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 DNAJC4Q9NNZ3 241 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 TECRQ9NZ01 308 aaKnown RBP8.5□□□□□ -1.05
CUX1-217ENST00000558836 S4R3C0 116 aa8.5□□□□□ -1.05
CUX1-217ENST00000558836 H3BTX0 84 aa8.49□□□□□ -1.05
CUX1-217ENST00000558836 VENTXO95231 258 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms