RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 AHSA2Q719I0 299 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 HSD17B13Q7Z5P4 300 aaPredicted RBP3.85□□□□□ -1.79
LRRC28-208ENST00000558771 SPATA12Q7Z6I5 190 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 SPAG16Q8N0X2 631 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 C6orf223Q8N319 242 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 DUSP18Q8NEJ0 188 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 TMEM203Q969S6 136 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 FAM210BQ96KR6 192 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 NXF2Q9GZY0 626 aaKnown RBP3.85□□□□□ -1.79
LRRC28-208ENST00000558771 RABAC1Q9UI14 185 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 PSORS1C1Q9UIG5 152 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 VPS13BQ7Z7G8 4022 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 NBDYA0A0U1RRE5 68 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 K7EQG2 157 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 SULT1C2O00338 296 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 RBFOX2O43251 390 aaKnown RBP eCLIP3.84□□□□□ -1.79
LRRC28-208ENST00000558771 IGHV3-48P01763 117 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 FGF2P09038 288 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 ZNF688P0C7X2 276 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 SPART-AS1P0CW21 52 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 ACTL10Q5JWF8 245 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 CNIH2Q6PI25 160 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 TOMM20LQ6UXN7 152 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 DMBX1Q8NFW5 382 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 STXBP6Q8NFX7 210 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 OR1L8Q8NGR8 309 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 SECTM1Q8WVN6 248 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 CYGBQ8WWM9 190 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 LSM10Q969L4 123 aaKnown RBP3.84□□□□□ -1.79
LRRC28-208ENST00000558771 SLC25A46Q96AG3 418 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 GRAMD2BQ96HH9 432 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 GINS3Q9BRX5 216 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 MND1Q9BWT6 205 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 HINT2Q9BX68 163 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 DCSTAMPQ9H295 470 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 RNF167Q9H6Y7 350 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 CCL28Q9NRJ3 127 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 NDUFA4L2Q9NRX3 87 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 LSM2Q9Y333 95 aaKnown RBP3.84□□□□□ -1.79
LRRC28-208ENST00000558771 V9GY05 133 aa3.84□□□□□ -1.79
LRRC28-208ENST00000558771 FLG2Q5D862 2391 aaPredicted RBP3.83□□□□□ -1.8
LRRC28-208ENST00000558771 ERICH4A6NGS2 130 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 I3L2K1 104 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 GNG7O60262 68 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 ARL6IP5O75915 188 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 ATP5HO75947 161 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 MT-CO2P00403 227 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 HTN3P15516 51 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 CALRP27797 417 aaKnown RBP3.83□□□□□ -1.8
LRRC28-208ENST00000558771 RANBP1P43487 201 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 EMP1P54849 157 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 MFAP4P55083 255 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 FAM3BP58499 235 aaPredicted RBP3.83□□□□□ -1.8
LRRC28-208ENST00000558771 RPS25P62851 125 aaKnown RBP3.83□□□□□ -1.8
LRRC28-208ENST00000558771 CATR1Q13166 79 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 RCN1Q15293 331 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 SPHARQ15513 63 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 CDNFQ49AH0 187 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 TMEM88Q6PEY1 159 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 BPIFB6Q8NFQ5 453 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 OR1P1Q8NH06 330 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 OR51H1Q8NH63 302 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 PRSS3P2Q8NHM4 247 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 DCANP1Q8TF63 244 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 NUDCD2Q8WVJ2 157 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 UFD1Q92890 307 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 RAB40CQ96S21 281 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 TXN2Q99757 166 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 NIPSNAP3BQ9BS92 247 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 YTHDF1Q9BYJ9 559 aaKnown RBP3.83□□□□□ -1.8
LRRC28-208ENST00000558771 PLEKHA2Q9HB19 425 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 PLCXD1Q9NUJ7 323 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 FKBP14Q9NWM8 211 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 XCL2Q9UBD3 114 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 ANXA10Q9UJ72 324 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 NSG2Q9Y328 171 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 TMED3Q9Y3Q3 217 aa3.83□□□□□ -1.8
LRRC28-208ENST00000558771 PUS1Q9Y606 427 aaKnown RBP eCLIP3.83□□□□□ -1.8
LRRC28-208ENST00000558771 A0A1B0GU03 582 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 A0A1W2PS18 150 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 TMEM189A5PLL7 270 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 METTL21EPA6NDL7 271 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 TMEM235A6NFC5 223 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 ZNF705FA8MVS1 300 aaPredicted RBP3.82□□□□□ -1.8
LRRC28-208ENST00000558771 GNAO1P09471 354 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 ZNF705DP0CH99 300 aaPredicted RBP3.82□□□□□ -1.8
LRRC28-208ENST00000558771 ZNF705BP0CI00 300 aaPredicted RBP3.82□□□□□ -1.8
LRRC28-208ENST00000558771 PTHLHP12272 177 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 FGF9P31371 208 aaPredicted RBP3.82□□□□□ -1.8
LRRC28-208ENST00000558771 FCGR2CP31995 323 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 OR10A3P58181 314 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 ERVK-16P61578 105 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 ARL6IP1Q15041 203 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 MSMO1Q15800 293 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 FAM222AQ5U5X8 452 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 HACD4Q5VWC8 232 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 ZNF705AQ6ZN79 300 aaPredicted RBP3.82□□□□□ -1.8
LRRC28-208ENST00000558771 ZNF600Q6ZNG1 722 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 ZNF818PQ6ZRF7 136 aa3.82□□□□□ -1.8
LRRC28-208ENST00000558771 DHRSXQ8N5I4 330 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms