RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 IL34Q6ZMJ4 242 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 SLC24A4Q8NFF2 622 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 PINX1Q96BK5 328 aaKnown RBP11.83□□□□□ -0.52
LINC01220-201ENST00000558575 CHRDL1Q9BU40 450 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 HIPK2Q9H2X6 1198 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 LCE6AA0A183 80 aa11.82□□□□□ -0.52
LINC01220-201ENST00000558575 GGCTO75223 188 aaKnown RBP11.82□□□□□ -0.52
LINC01220-201ENST00000558575 TMEM50AO95807 157 aa11.82□□□□□ -0.52
LINC01220-201ENST00000558575 CTSGP08311 255 aa11.82□□□□□ -0.52
LINC01220-201ENST00000558575 FCGR2BP31994 310 aaPredicted RBP11.82□□□□□ -0.52
LINC01220-201ENST00000558575 ARL3P36405 182 aa11.82□□□□□ -0.52
LINC01220-201ENST00000558575 SYNJ2BPP57105 145 aa11.82□□□□□ -0.52
LINC01220-201ENST00000558575 DCTN2Q13561 401 aaKnown RBP11.82□□□□□ -0.52
LINC01220-201ENST00000558575 FAM209BQ5JX69 171 aa11.82□□□□□ -0.52
LINC01220-201ENST00000558575 GPN1Q9HCN4 374 aaPredicted RBP11.82□□□□□ -0.52
LINC01220-201ENST00000558575 GSKIPQ9P0R6 139 aa11.82□□□□□ -0.52
LINC01220-201ENST00000558575 U3KQ87 197 aa11.82□□□□□ -0.52
LINC01220-201ENST00000558575 OR2T8A6NH00 312 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 C15orf62A8K5M9 175 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 WRBO00258 174 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 TGOLN2O43493 480 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 MED6O75586 246 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 IFNA10P01566 189 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 NPY1RP25929 384 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 NKX2-1P43699 371 aaPredicted RBP11.81□□□□□ -0.52
LINC01220-201ENST00000558575 MFAP4P55083 255 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 PAX9P55771 341 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 RPEL1Q2QD12 228 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 ACSM6Q6P461 480 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 GPHB5Q86YW7 130 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 ATP6V0BQ99437 205 aa11.81□□□□□ -0.52
LINC01220-201ENST00000558575 IGHV3-35A0A0C4DH35 117 aa11.8□□□□□ -0.52
LINC01220-201ENST00000558575 C7orf66A4D0T2 115 aa11.8□□□□□ -0.52
LINC01220-201ENST00000558575 FAM25EA8MYX2 175 aa11.8□□□□□ -0.52
LINC01220-201ENST00000558575 SEC14L6B5MCN3 397 aa11.8□□□□□ -0.52
LINC01220-201ENST00000558575 SIX6O95475 246 aa11.8□□□□□ -0.52
LINC01220-201ENST00000558575 MBPP02686 304 aaPredicted RBP11.8□□□□□ -0.52
LINC01220-201ENST00000558575 EGFEM1PQ0D2K5 195 aa11.8□□□□□ -0.52
LINC01220-201ENST00000558575 ADAMTSL5Q6ZMM2 481 aa11.8□□□□□ -0.52
LINC01220-201ENST00000558575 RNASEH2CQ8TDP1 164 aaKnown RBP11.8□□□□□ -0.52
LINC01220-201ENST00000558575 WDR89Q96FK6 387 aaPredicted RBP11.8□□□□□ -0.52
LINC01220-201ENST00000558575 C2orf50Q96LR7 162 aa11.8□□□□□ -0.52
LINC01220-201ENST00000558575 OR4C12Q96R67 309 aa11.8□□□□□ -0.52
LINC01220-201ENST00000558575 TXN2Q99757 166 aa11.8□□□□□ -0.52
LINC01220-201ENST00000558575 MCRIP2Q9BUT9 160 aaKnown RBP11.8□□□□□ -0.52
LINC01220-201ENST00000558575 C5orf51A6NDU8 294 aa11.79□□□□□ -0.52
LINC01220-201ENST00000558575 CORTO00230 105 aa11.79□□□□□ -0.52
LINC01220-201ENST00000558575 EDN2P20800 178 aa11.79□□□□□ -0.52
LINC01220-201ENST00000558575 ATP5IP56385 69 aaPredicted RBP11.79□□□□□ -0.52
LINC01220-201ENST00000558575 TATDN3Q17R31 274 aa11.79□□□□□ -0.52
LINC01220-201ENST00000558575 Q56UQ5 140 aa11.79□□□□□ -0.52
LINC01220-201ENST00000558575 PRSS54Q6PEW0 395 aa11.79□□□□□ -0.52
LINC01220-201ENST00000558575 UNQ9165/PRO28630Q6UXU0 137 aa11.79□□□□□ -0.52
LINC01220-201ENST00000558575 UBAC2Q8NBM4 344 aa11.79□□□□□ -0.52
LINC01220-201ENST00000558575 OR9G4Q8NGQ1 327 aa11.79□□□□□ -0.52
LINC01220-201ENST00000558575 BSCL2Q96G97 398 aaPredicted RBP11.79□□□□□ -0.52
LINC01220-201ENST00000558575 C11orf1Q9H5F2 150 aa11.79□□□□□ -0.52
LINC01220-201ENST00000558575 RCL1Q9Y2P8 373 aaKnown RBP11.79□□□□□ -0.52
LINC01220-201ENST00000558575 SCGB1D2O95969 90 aa11.78□□□□□ -0.52
LINC01220-201ENST00000558575 CSN3P07498 182 aa11.78□□□□□ -0.52
LINC01220-201ENST00000558575 OPRK1P41145 380 aa11.78□□□□□ -0.52
LINC01220-201ENST00000558575 OXA1LQ15070 435 aa11.78□□□□□ -0.52
LINC01220-201ENST00000558575 MUC7Q8TAX7 377 aa11.78□□□□□ -0.52
LINC01220-201ENST00000558575 SMIM8Q96KF7 97 aa11.78□□□□□ -0.52
LINC01220-201ENST00000558575 CIB3Q96Q77 187 aaPredicted RBP11.78□□□□□ -0.52
LINC01220-201ENST00000558575 ZNF436Q9C0F3 470 aaPredicted RBP11.78□□□□□ -0.52
LINC01220-201ENST00000558575 ALG5Q9Y673 324 aa11.78□□□□□ -0.52
LINC01220-201ENST00000558575 PMS2P5A8MQ11 134 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 PRSS46E5RG02 174 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 H3BP45 60 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 LGALS9O00182 355 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 GOSR2O14653 212 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 SSSCA1O60232 199 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 IFNA4P05014 189 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 NHLRC4P0CG21 123 aaPredicted RBP11.77□□□□□ -0.53
LINC01220-201ENST00000558575 RGS21Q2M5E4 152 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 C9orf66Q5T8R8 295 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 SPSB3Q6PJ21 355 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 GSG1LQ6UXU4 331 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 NOXA1Q86UR1 476 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 OR4X1Q8NH49 305 aa11.77□□□□□ -0.53
LINC01220-201ENST00000558575 K7EPK0 472 aa11.76□□□□□ -0.53
LINC01220-201ENST00000558575 CLN5O75503 358 aa11.76□□□□□ -0.53
LINC01220-201ENST00000558575 NPBWR1P48145 328 aa11.76□□□□□ -0.53
LINC01220-201ENST00000558575 H2BFSP57053 126 aa11.76□□□□□ -0.53
LINC01220-201ENST00000558575 FAM106AQ4KMX7 169 aa11.76□□□□□ -0.53
LINC01220-201ENST00000558575 SPANXN5Q5MJ07 72 aa11.76□□□□□ -0.53
LINC01220-201ENST00000558575 TMEM116Q8NCL8 245 aa11.76□□□□□ -0.53
LINC01220-201ENST00000558575 PSENENQ9NZ42 101 aa11.76□□□□□ -0.53
LINC01220-201ENST00000558575 PCLOQ9Y6V0 5065 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 HUWE1Q7Z6Z7 4374 aaKnown RBP11.75□□□□□ -0.53
LINC01220-201ENST00000558575 RPS10-NUDT3A0A1W2PQS6 291 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 ZNF320A2RRD8 509 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 TMEM213A2RRL7 107 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 GNG7O60262 68 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 SAP30O75446 220 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 CCNKO75909 580 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 IGKV1-17P01599 117 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 GPX4P36969 197 aaPredicted RBP11.75□□□□□ -0.53
LINC01220-201ENST00000558575 RND2P52198 227 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms