RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PUS1Q9Y606 427 aaKnown RBP eCLIP8.85□□□□□ -0.99
HERC1-202ENST00000558324 ANKRD20A5PA0PJZ0 165 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 CRYM-AS1A6NIL9 109 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 INS-IGF2F8WCM5 200 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 CORTO00230 105 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 APOHP02749 345 aaPredicted RBP8.84□□□□□ -0.99
HERC1-202ENST00000558324 TNFSF8P32971 234 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 SPCS3P61009 180 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 DHODHQ02127 395 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 MLANAQ16655 118 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 ZNF600Q6ZNG1 722 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 TCF24Q7RTU0 167 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 WFDC3Q8IUB2 231 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 FAM219AQ8IW50 185 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 IL17DQ8TAD2 202 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 ST8SIA2Q92186 375 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 GPR146Q96CH1 333 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 FNDC4Q9H6D8 234 aaPredicted RBP8.84□□□□□ -0.99
HERC1-202ENST00000558324 HEYLQ9NQ87 328 aaPredicted RBP8.84□□□□□ -0.99
HERC1-202ENST00000558324 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.84□□□□□ -0.99
HERC1-202ENST00000558324 RABL2AQ9UBK7 228 aaPredicted RBP8.84□□□□□ -0.99
HERC1-202ENST00000558324 RSL24D1Q9UHA3 163 aaKnown RBP8.84□□□□□ -0.99
HERC1-202ENST00000558324 RABL2BQ9UNT1 228 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 GPR132Q9UNW8 380 aa8.84□□□□□ -0.99
HERC1-202ENST00000558324 TENM2Q9NT68 2774 aa8.83□□□□□ -1
HERC1-202ENST00000558324 A0A1B0GU03 582 aa8.83□□□□□ -1
HERC1-202ENST00000558324 FABP12A6NFH5 140 aa8.83□□□□□ -1
HERC1-202ENST00000558324 CEBPZOSA8MTT3 80 aa8.83□□□□□ -1
HERC1-202ENST00000558324 GSTZ1O43708 216 aaPredicted RBP8.83□□□□□ -1
HERC1-202ENST00000558324 TMEM50AO95807 157 aa8.83□□□□□ -1
HERC1-202ENST00000558324 RPL11P62913 178 aaKnown RBP8.83□□□□□ -1
HERC1-202ENST00000558324 PVRIGQ6DKI7 326 aa8.83□□□□□ -1
HERC1-202ENST00000558324 TMEM230Q96A57 120 aa8.83□□□□□ -1
HERC1-202ENST00000558324 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
HERC1-202ENST00000558324 CSMD3Q7Z407 3707 aa8.82□□□□□ -1
HERC1-202ENST00000558324 A0A0J9YWU9 116 aa8.82□□□□□ -1
HERC1-202ENST00000558324 CCDC160A6NGH7 325 aa8.82□□□□□ -1
HERC1-202ENST00000558324 SPRY2O43597 315 aa8.82□□□□□ -1
HERC1-202ENST00000558324 DFFBO76075 338 aa8.82□□□□□ -1
HERC1-202ENST00000558324 AKR1C4P17516 323 aa8.82□□□□□ -1
HERC1-202ENST00000558324 BMI1P35226 326 aa8.82□□□□□ -1
HERC1-202ENST00000558324 PMS2P11Q13670 270 aa8.82□□□□□ -1
HERC1-202ENST00000558324 Q6ZWC4 215 aa8.82□□□□□ -1
HERC1-202ENST00000558324 LILRB2Q8N423 598 aa8.82□□□□□ -1
HERC1-202ENST00000558324 STPG3Q8N7X2 389 aa8.82□□□□□ -1
HERC1-202ENST00000558324 GALNT14Q96FL9 552 aa8.82□□□□□ -1
HERC1-202ENST00000558324 MAP6D1Q9H9H5 199 aa8.82□□□□□ -1
HERC1-202ENST00000558324 SCP2D1Q9UJQ7 156 aa8.82□□□□□ -1
HERC1-202ENST00000558324 KIR2DL5BA0A0G2JN68 375 aa8.81□□□□□ -1
HERC1-202ENST00000558324 KIR2DL5BA0A0G2JPC4 375 aa8.81□□□□□ -1
HERC1-202ENST00000558324 CLN5O75503 358 aa8.81□□□□□ -1
HERC1-202ENST00000558324 SCGB2A1O75556 95 aa8.81□□□□□ -1
HERC1-202ENST00000558324 HTR2BP41595 481 aa8.81□□□□□ -1
HERC1-202ENST00000558324 PAFAH1B2P68402 229 aa8.81□□□□□ -1
HERC1-202ENST00000558324 TMEM187Q14656 261 aa8.81□□□□□ -1
HERC1-202ENST00000558324 BSXQ3C1V8 233 aa8.81□□□□□ -1
HERC1-202ENST00000558324 TIGITQ495A1 244 aa8.81□□□□□ -1
HERC1-202ENST00000558324 AARDQ4LEZ3 155 aa8.81□□□□□ -1
HERC1-202ENST00000558324 FAM90A2PQ658T7 463 aa8.81□□□□□ -1
HERC1-202ENST00000558324 KIR2DL5AQ8N109 375 aa8.81□□□□□ -1
HERC1-202ENST00000558324 SLC24A4Q8NFF2 622 aa8.81□□□□□ -1
HERC1-202ENST00000558324 OR4X1Q8NH49 305 aa8.81□□□□□ -1
HERC1-202ENST00000558324 OR52E5Q8NH55 327 aa8.81□□□□□ -1
HERC1-202ENST00000558324 KIR2DL5BQ8NHK3 375 aa8.81□□□□□ -1
HERC1-202ENST00000558324 TMEM56-RWDD3S4R434 201 aa8.81□□□□□ -1
HERC1-202ENST00000558324 RPS10-NUDT3A0A1W2PQS6 291 aa8.8□□□□□ -1
HERC1-202ENST00000558324 CXorf65A6NEN9 183 aa8.8□□□□□ -1
HERC1-202ENST00000558324 DNASE2O00115 360 aaPredicted RBP8.8□□□□□ -1
HERC1-202ENST00000558324 UBE2CO00762 179 aa8.8□□□□□ -1
HERC1-202ENST00000558324 JTBO76095 146 aa8.8□□□□□ -1
HERC1-202ENST00000558324 SULT1A3P0DMM9 295 aa8.8□□□□□ -1
HERC1-202ENST00000558324 SULT1A4P0DMN0 295 aa8.8□□□□□ -1
HERC1-202ENST00000558324 NPPCP23582 126 aa8.8□□□□□ -1
HERC1-202ENST00000558324 RND2P52198 227 aa8.8□□□□□ -1
HERC1-202ENST00000558324 EWSR1Q01844 656 aaKnown RBP eCLIP8.8□□□□□ -1
HERC1-202ENST00000558324 PYDC2Q56P42 97 aa8.8□□□□□ -1
HERC1-202ENST00000558324 LEMD1Q68G75 181 aa8.8□□□□□ -1
HERC1-202ENST00000558324 TMED4Q7Z7H5 227 aa8.8□□□□□ -1
HERC1-202ENST00000558324 LYG2Q86SG7 212 aa8.8□□□□□ -1
HERC1-202ENST00000558324 FAM24BQ8N5W8 94 aa8.8□□□□□ -1
HERC1-202ENST00000558324 SCGB3A2Q96PL1 93 aa8.8□□□□□ -1
HERC1-202ENST00000558324 METTL26Q96S19 204 aa8.8□□□□□ -1
HERC1-202ENST00000558324 SOSTQ9BQB4 213 aa8.8□□□□□ -1
HERC1-202ENST00000558324 MS4A6AQ9H2W1 248 aa8.8□□□□□ -1
HERC1-202ENST00000558324 TMEM231Q9H6L2 316 aa8.8□□□□□ -1
HERC1-202ENST00000558324 VSIRQ9H7M9 311 aa8.8□□□□□ -1
HERC1-202ENST00000558324 RABAC1Q9UI14 185 aa8.8□□□□□ -1
HERC1-202ENST00000558324 TP53TG1Q9Y2A0 90 aa8.8□□□□□ -1
HERC1-202ENST00000558324 KCNIP3Q9Y2W7 256 aa8.8□□□□□ -1
HERC1-202ENST00000558324 IGKV1-17P01599 117 aa8.79□□□□□ -1
HERC1-202ENST00000558324 NPY1RP25929 384 aa8.79□□□□□ -1
HERC1-202ENST00000558324 DEFB131AP59861 70 aa8.79□□□□□ -1
HERC1-202ENST00000558324 SUPT4H1P63272 117 aaKnown RBP8.79□□□□□ -1
HERC1-202ENST00000558324 C2orf83Q53S99 150 aa8.79□□□□□ -1
HERC1-202ENST00000558324 PRSS54Q6PEW0 395 aa8.79□□□□□ -1
HERC1-202ENST00000558324 LYZL2Q7Z4W2 148 aa8.79□□□□□ -1
HERC1-202ENST00000558324 STXBP6Q8NFX7 210 aa8.79□□□□□ -1
HERC1-202ENST00000558324 TMEM170AQ8WVE7 144 aa8.79□□□□□ -1
HERC1-202ENST00000558324 IL22RA2Q969J5 263 aa8.79□□□□□ -1
HERC1-202ENST00000558324 RNF183Q96D59 192 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms