RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 ST8SIA3O43173 380 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 GNG7O60262 68 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 SCAF4O95104 1147 aaKnown RBP7.55□□□□□ -1.2
USP3-207ENST00000558218 BMI1P35226 326 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 PPP5CP53041 499 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 SPCS3P61009 180 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 SP6Q3SY56 376 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 SLC35G3Q8N808 338 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 UBAC2Q8NBM4 344 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 DEDD2Q8WXF8 326 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 RBPMSQ93062 196 aaKnown RBP7.55□□□□□ -1.2
USP3-207ENST00000558218 IL22RA2Q969J5 263 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 C20orf24Q9BUV8 137 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 GGTLC1Q9BX51 225 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 SLIRPQ9GZT3 109 aaKnown RBP7.55□□□□□ -1.2
USP3-207ENST00000558218 ENY2Q9NPA8 101 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 SCP2D1Q9UJQ7 156 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 TRAV30A0A087WSZ9 112 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 TRAV14DV4A0A0A6YYC5 116 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 IGHV3-21A0A0B4J1V1 117 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 KIR2DL5BA0A0G2JN68 375 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 KIR2DL5BA0A0G2JPC4 375 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 IGHV7-4-1A0A0J9YVY3 117 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 ANKRD20A5PA0PJZ0 165 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 FABP12A6NFH5 140 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 SCGB2A1O75556 95 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 TNFSF8P32971 234 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 ETV6P41212 452 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 HTR2BP41595 481 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 MLANAQ16655 118 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 BSXQ3C1V8 233 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 KIR2DL5AQ8N109 375 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 TMEM116Q8NCL8 245 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 OR4C16Q8NGL9 310 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 KIR2DL5BQ8NHK3 375 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 GALNT14Q96FL9 552 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 GINS3Q9BRX5 216 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 C6orf62Q9GZU0 229 aaPredicted RBP7.54□□□□□ -1.2
USP3-207ENST00000558218 NAA60Q9H7X0 242 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 TP53TG1Q9Y2A0 90 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 TMEM56-RWDD3S4R434 201 aa7.54□□□□□ -1.2
USP3-207ENST00000558218 CRYM-AS1A6NIL9 109 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 H3BMQ9 156 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 CHEK1O14757 476 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 TMEM50AO95807 157 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 OR5AC1P0C628 307 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 RNASE2P10153 161 aaKnown RBP7.53□□□□□ -1.2
USP3-207ENST00000558218 APOC4P55056 127 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 IZUMO4Q1ZYL8 232 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 ZNF600Q6ZNG1 722 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 Q6ZRM9 215 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 Q6ZWC4 215 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 NOXA1Q86UR1 476 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 SELENOHQ8IZQ5 122 aaKnown RBP7.53□□□□□ -1.2
USP3-207ENST00000558218 OR4X1Q8NH49 305 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 MCFD2Q8NI22 146 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 RNASE11Q8TAA1 199 aaKnown RBP7.53□□□□□ -1.2
USP3-207ENST00000558218 PINX1Q96BK5 328 aaKnown RBP7.53□□□□□ -1.2
USP3-207ENST00000558218 RHPN1-AS1Q9BWJ2 59 aa7.53□□□□□ -1.2
USP3-207ENST00000558218 TRAV2A0A0B4J234 112 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 RPS10-NUDT3A0A1W2PQS6 291 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 A0A1W2PS18 150 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 CLN5O75503 358 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 YIF1AO95070 293 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 FAUP35544 74 aaKnown RBP7.52□□□□□ -1.21
USP3-207ENST00000558218 HOXA1P49639 335 aaPredicted RBP7.52□□□□□ -1.21
USP3-207ENST00000558218 ATP5IP56385 69 aaPredicted RBP7.52□□□□□ -1.21
USP3-207ENST00000558218 AP3S2P59780 193 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 PAFAH1B2P68402 229 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 SRPXP78539 464 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 FAM90A2PQ658T7 463 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 TOMM20LQ6UXN7 152 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 OR51S1Q8NGJ8 323 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 RNASEH2CQ8TDP1 164 aaKnown RBP7.52□□□□□ -1.21
USP3-207ENST00000558218 RNF141Q8WVD5 230 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 ZNF414Q96IQ9 312 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 WFDC10AQ9H1F0 79 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 VSIRQ9H7M9 311 aa7.52□□□□□ -1.21
USP3-207ENST00000558218 A0A0B4J2A0 478 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 A0A0G2JRQ6 117 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 ZNF701M0R085 212 aaPredicted RBP7.51□□□□□ -1.21
USP3-207ENST00000558218 DFFBO76075 338 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 SLC25A4P12235 298 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 ANXA3P12429 323 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 ATF4P18848 351 aaPredicted RBP7.51□□□□□ -1.21
USP3-207ENST00000558218 NPPCP23582 126 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 C2orf83Q53S99 150 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 ETFRF1Q6IPR1 90 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 FAAP20Q6NZ36 180 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 STPG3Q8N7X2 389 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 GPR146Q96CH1 333 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 RNF2Q99496 336 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 OVOL2Q9BRP0 275 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 TMEM231Q9H6L2 316 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 HEYLQ9NQ87 328 aaPredicted RBP7.51□□□□□ -1.21
USP3-207ENST00000558218 SHPKQ9UHJ6 478 aa7.51□□□□□ -1.21
USP3-207ENST00000558218 HUWE1Q7Z6Z7 4374 aaKnown RBP7.51□□□□□ -1.21
USP3-207ENST00000558218 ZNF207O43670 478 aaKnown RBP7.5□□□□□ -1.21
USP3-207ENST00000558218 IGHV3-48P01763 117 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 SULT1A3P0DMM9 295 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms