RNA–Protein interactions for RNA: ENST00000558176.1

HMG20A-203, Transcript of high mobility group 20A, humanhuman

TSL 3

Gene HMG20A, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-203ENST00000558176 FAM231AP0DMU4 169 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 FAM231CP0DMU5 169 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 SPP1P10451 314 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 G6PCP35575 357 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 CMC4P56277 68 aaPredicted RBP2.29□□□□□ -2.04
HMG20A-203ENST00000558176 MLLT11Q13015 90 aaPredicted RBP2.29□□□□□ -2.04
HMG20A-203ENST00000558176 IRF3Q14653 427 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 ARL6IP1Q15041 203 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 SSX1Q16384 188 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 POU2AF1Q16633 256 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 C12orf74Q32Q52 190 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 OGFRL1Q5TC84 451 aaPredicted RBP2.29□□□□□ -2.04
HMG20A-203ENST00000558176 UBE2UQ5VVX9 321 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 THOC7Q6I9Y2 204 aaKnown RBP2.29□□□□□ -2.04
HMG20A-203ENST00000558176 C22orf42Q6IC83 251 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 ZNF818PQ6ZRF7 136 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 TRPT1Q86TN4 253 aaKnown RBP2.29□□□□□ -2.04
HMG20A-203ENST00000558176 POM121L12Q8N7R1 296 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 MAPKAPK5-AS1Q8N8E1 139 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 BEST4Q8NFU0 473 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 STXBP6Q8NFX7 210 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 TSPAN14Q8NG11 270 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 OR1L8Q8NGR8 309 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 LGALS14Q8TCE9 139 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 PINX1Q96BK5 328 aaKnown RBP2.29□□□□□ -2.04
HMG20A-203ENST00000558176 OR10C1Q96KK4 312 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 MGLLQ99685 303 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 SRSF8Q9BRL6 282 aaKnown RBP2.29□□□□□ -2.04
HMG20A-203ENST00000558176 NDUFAF3Q9BU61 184 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 RNF126Q9BV68 326 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 DCSTAMPQ9H295 470 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 SCN3BQ9NY72 215 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 COMMD9Q9P000 198 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 DAPK2Q9UIK4 370 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 TBC1D24Q9ULP9 559 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 OR51B2Q9Y5P1 312 aa2.29□□□□□ -2.04
HMG20A-203ENST00000558176 PUS1Q9Y606 427 aaKnown RBP eCLIP2.29□□□□□ -2.04
HMG20A-203ENST00000558176 TRAV1-2A0A0B4J238 106 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 ZNF705EA8MWA4 302 aaPredicted RBP2.28□□□□□ -2.04
HMG20A-203ENST00000558176 C16orf90A8MZG2 172 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 I3L2K1 104 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 CASQ2O14958 399 aaPredicted RBP2.28□□□□□ -2.04
HMG20A-203ENST00000558176 SNAPC5O75971 98 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 MT-CO2P00403 227 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 IFNA10P01566 189 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 IFNA21P01568 189 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 IFNA17P01571 189 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 FGF2P09038 288 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 HTN3P15516 51 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 LPAR6P43657 344 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 EMP1P54849 157 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 MFAP4P55083 255 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 HERV-K104P61576 105 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 MSMO1Q15800 293 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 TBCEQ15813 527 aaPredicted RBP2.28□□□□□ -2.04
HMG20A-203ENST00000558176 LGALS9BQ3B8N2 356 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 TMEM41BQ5BJD5 291 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 SPINK9Q5DT21 86 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 SOHLH1Q5JUK2 328 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 ACTL10Q5JWF8 245 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 FAM90A2PQ658T7 463 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 MORN3Q6PF18 240 aaPredicted RBP2.28□□□□□ -2.04
HMG20A-203ENST00000558176 TOMM20LQ6UXN7 152 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 ZNF367Q7RTV3 350 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 HSD17B13Q7Z5P4 300 aaPredicted RBP2.28□□□□□ -2.04
HMG20A-203ENST00000558176 HOGA1Q86XE5 327 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 OR1P1Q8NH06 330 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 FCAMRQ8WWV6 532 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 MOB3AQ96BX8 217 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 DGCR14Q96DF8 476 aaKnown RBP2.28□□□□□ -2.04
HMG20A-203ENST00000558176 SLC25A38Q96DW6 304 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 TMEM56Q96MV1 263 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 ATP6V0BQ99437 205 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 GINS3Q9BRX5 216 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 NXF2Q9GZY0 626 aaKnown RBP2.28□□□□□ -2.04
HMG20A-203ENST00000558176 VCX3BQ9H321 246 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 PLEKHA2Q9HB19 425 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 NDUFA4L2Q9NRX3 87 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 TMEM14BQ9NUH8 114 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 NDUFB11Q9NX14 153 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 RHBDL2Q9NX52 303 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 PRNDQ9UKY0 176 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 TPRKBQ9Y3C4 175 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
HMG20A-203ENST00000558176 ABCA13Q86UQ4 5058 aa2.28□□□□□ -2.05
HMG20A-203ENST00000558176 TRAV18A0A075B6X5 111 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 IGHV3OR16-12A0A075B7B8 117 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 TRAV2A0A0B4J234 112 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 A0A1B0GU03 582 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 K7EQG2 157 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 PGLYRP1O75594 196 aaPredicted RBP2.27□□□□□ -2.05
HMG20A-203ENST00000558176 SCGNO76038 276 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 NXPH3O95157 252 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 IGKV3-20P01619 116 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 CD74P04233 296 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 CD5P06127 495 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 SPART-AS1P0CW21 52 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 NPPCP23582 126 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 F2RP25116 425 aa2.27□□□□□ -2.05
HMG20A-203ENST00000558176 NPY1RP25929 384 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms