RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ZNF207O43670 478 aaKnown RBP6.84□□□□□ -1.31
SPG11-207ENST00000558138 UPK1BO75841 260 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 IGLV1-51P01701 117 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 H2AFB2P0C5Z0 115 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 RAB11AP62491 216 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 TM4SF20Q53R12 229 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 ETFRF1Q6IPR1 90 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 UNQ9165/PRO28630Q6UXU0 137 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 RBPMS2Q6ZRY4 209 aaKnown RBP6.84□□□□□ -1.31
SPG11-207ENST00000558138 LRTM2Q8N967 370 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 OR52B4Q8NGK2 314 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 MAGT1Q9H0U3 335 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 GSKIPQ9P0R6 139 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 HSPB7Q9UBY9 170 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 SMAD5-AS1Q9Y6J3 95 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 MEGF8Q7Z7M0 2845 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 C5orf51A6NDU8 294 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 ADAP1O75689 374 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 CBLN1P23435 193 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 BMI1P35226 326 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 ASAH1Q13510 395 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 CD300EQ496F6 205 aaPredicted RBP6.83□□□□□ -1.32
SPG11-207ENST00000558138 C2orf83Q53S99 150 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 BTNL8Q6UX41 500 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 OR2K2Q8NGT1 345 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 RNASEH2CQ8TDP1 164 aaKnown RBP6.83□□□□□ -1.32
SPG11-207ENST00000558138 TMEM190Q8WZ59 177 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 MARC2Q969Z3 335 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 ACY3Q96HD9 319 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 SLC35E1Q96K37 410 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 CIB3Q96Q77 187 aaPredicted RBP6.83□□□□□ -1.32
SPG11-207ENST00000558138 ATP6V0BQ99437 205 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 GINS3Q9BRX5 216 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 CHRDL1Q9BU40 450 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 ZNF436Q9C0F3 470 aaPredicted RBP6.83□□□□□ -1.32
SPG11-207ENST00000558138 DAZ1Q9NQZ3 744 aaKnown RBP6.83□□□□□ -1.32
SPG11-207ENST00000558138 TECRQ9NZ01 308 aaKnown RBP6.83□□□□□ -1.32
SPG11-207ENST00000558138 U3KQ87 197 aa6.83□□□□□ -1.32
SPG11-207ENST00000558138 TRAV30A0A087WSZ9 112 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 TMEM213A2RRL7 107 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 A8MWP6 167 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 FAM90A26D6RGX4 464 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 SYNGR2O43760 224 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 SSSCA1O60232 199 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 CLN5O75503 358 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 SCAF4O95104 1147 aaKnown RBP6.82□□□□□ -1.32
SPG11-207ENST00000558138 SLC25A4P12235 298 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 SLC25A6P12236 298 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 EDN2P20800 178 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 NKX2-1P43699 371 aaPredicted RBP6.82□□□□□ -1.32
SPG11-207ENST00000558138 RND2P52198 227 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 ELLP55199 621 aaPredicted RBP6.82□□□□□ -1.32
SPG11-207ENST00000558138 CD81P60033 236 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 IAH1Q2TAA2 248 aaPredicted RBP6.82□□□□□ -1.32
SPG11-207ENST00000558138 AARDQ4LEZ3 155 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 SPANXN5Q5MJ07 72 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 LAMTOR1Q6IAA8 161 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 C11orf87Q6NUJ2 197 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 IL34Q6ZMJ4 242 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 ZNF600Q6ZNG1 722 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 SLC16A13Q7RTY0 426 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 ZNF431Q8TF32 576 aaPredicted RBP6.82□□□□□ -1.32
SPG11-207ENST00000558138 NARS2Q96I59 477 aaKnown RBP6.82□□□□□ -1.32
SPG11-207ENST00000558138 SEC22CQ9BRL7 303 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 TUBA4BQ9H853 241 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 GPN1Q9HCN4 374 aaPredicted RBP6.82□□□□□ -1.32
SPG11-207ENST00000558138 SIGLEC8Q9NYZ4 499 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 MRPL27Q9P0M9 148 aaKnown RBP6.82□□□□□ -1.32
SPG11-207ENST00000558138 TBC1D24Q9ULP9 559 aa6.82□□□□□ -1.32
SPG11-207ENST00000558138 IGHV3-49A0A0A0MS15 119 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 TRAV14DV4A0A0A6YYC5 116 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 SMCO3A2RU48 225 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 IZUMO1RA6ND01 250 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 F8W735 103 aaPredicted RBP6.81□□□□□ -1.32
SPG11-207ENST00000558138 H3BP45 60 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 L7N2F9 121 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 CCSO14618 274 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 CTSGP08311 255 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 OR10J1P30954 320 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 FCGR2BP31994 310 aaPredicted RBP6.81□□□□□ -1.32
SPG11-207ENST00000558138 ADMP35318 185 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 RPL11P62913 178 aaKnown RBP6.81□□□□□ -1.32
SPG11-207ENST00000558138 VAMP2P63027 116 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 MLANAQ16655 118 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 DEFB114Q30KQ6 69 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 TIGITQ495A1 244 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 C12orf45Q8N5I9 185 aaPredicted RBP6.81□□□□□ -1.32
SPG11-207ENST00000558138 OR1S2Q8NGQ3 325 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 OR4X1Q8NH49 305 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 MITD1Q8WV92 249 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 WDR89Q96FK6 387 aaPredicted RBP6.81□□□□□ -1.32
SPG11-207ENST00000558138 ASCL2Q99929 193 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 FNDC4Q9H6D8 234 aaPredicted RBP6.81□□□□□ -1.32
SPG11-207ENST00000558138 MLXQ9UH92 298 aa6.81□□□□□ -1.32
SPG11-207ENST00000558138 STRAPQ9Y3F4 350 aaKnown RBP6.81□□□□□ -1.32
SPG11-207ENST00000558138 PUS1Q9Y606 427 aaKnown RBP eCLIP6.81□□□□□ -1.32
SPG11-207ENST00000558138 IGKV3-7A0A075B6H7 116 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 IGHV3OR16-13A0A075B7E8 117 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 IGHV3-74A0A0B4J1X5 117 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 ZFP92A6NM28 416 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms