RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PINX1Q96BK5 328 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 C20orf24Q9BUV8 137 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 HIPK2Q9H2X6 1198 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 SRD5A3Q9H8P0 318 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 EDA2RQ9HAV5 297 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 SMPXQ9UHP9 88 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 SCP2D1Q9UJQ7 156 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 TMEM56-RWDD3S4R434 201 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 RYR3Q15413 4870 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 CCDC160A6NGH7 325 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 TSPAN4O14817 238 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 H2AFB1P0C5Y9 115 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 H2AFB2P0C5Z0 115 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 SPCS3P61009 180 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 SUPT4H1P63272 117 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 RELQ04864 619 aaPredicted RBP6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 TMEM187Q14656 261 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 ZNF79Q15937 498 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 MLANAQ16655 118 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 BSXQ3C1V8 233 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 ANKRD55Q3KP44 614 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 TMEM268Q5VZI3 342 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 OR52E5Q8NH55 327 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 RNASE11Q8TAA1 199 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 TRIM63Q969Q1 353 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 GALNT14Q96FL9 552 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 OR10C1Q96KK4 312 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 SCGB3A2Q96PL1 93 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 SPAG8Q99932 426 aaPredicted RBP6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 PDCD10Q9BUL8 212 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 FNDC4Q9H6D8 234 aaPredicted RBP6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 RETNQ9HD89 108 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 MCUBQ9NWR8 336 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 PRR13Q9NZ81 148 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 MRPL36Q9P0J6 103 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 CACNG5Q9UF02 275 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 V9GYH0 126 aa6.55□□□□□ -1.36
SNRPA1-206ENST00000558059 IGHV7-4-1A0A0J9YVY3 117 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 ZNF701M0R085 212 aaPredicted RBP6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 CHEK1O14757 476 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 GNG7O60262 68 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 YIF1AO95070 293 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 TMEM50AO95807 157 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 NPBWR1P48145 328 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 HOXA1P49639 335 aaPredicted RBP6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 SUB1P53999 127 aaKnown RBP eCLIP6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 PYDC2Q56P42 97 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 CASC10Q5T4H9 136 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 LAMTOR1Q6IAA8 161 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 TOMM20LQ6UXN7 152 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 CCDC190Q86UF4 302 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 TMEM116Q8NCL8 245 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 DUSP18Q8NEJ0 188 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 IL22RA2Q969J5 263 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 ENY2Q9NPA8 101 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 KCNIP3Q9Y2W7 256 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 AGRNO00468 2067 aa6.54□□□□□ -1.36
SNRPA1-206ENST00000558059 IGHV3-49A0A0A0MS15 119 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 TRAV14DV4A0A0A6YYC5 116 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 CORTO00230 105 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 AKR1C4P17516 323 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 ODF3L2Q3SX64 289 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 NMSQ5H8A3 153 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 FAM90A2PQ658T7 463 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 ZNF600Q6ZNG1 722 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 LYZL2Q7Z4W2 148 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 LILRB2Q8N423 598 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 TOMM5Q8N4H5 51 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 OR4X1Q8NH49 305 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 TMEM170AQ8WVE7 144 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 RNF2Q99496 336 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 FAM110AQ9BQ89 295 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 RHPN1-AS1Q9BWJ2 59 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 HEYLQ9NQ87 328 aaPredicted RBP6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 UBQLN2Q9UHD9 624 aa6.53□□□□□ -1.36
SNRPA1-206ENST00000558059 DNAH1Q9P2D7 4330 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 IGHV3OR16-13A0A075B7E8 117 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 LOC102724200A0A096LPH7 203 aaPredicted RBP6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 IGHV3-74A0A0B4J1X5 117 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 A0A0B4J2A0 478 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 A0A1B0GU03 582 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 A6NJY4 79 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 CLN5O75503 358 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 IGKV1-17P01599 117 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 APOHP02749 345 aaPredicted RBP6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 SULT1A3P0DMM9 295 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 SULT1A4P0DMN0 295 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 LYL1P12980 280 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 S100A5P33763 92 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 FAUP35544 74 aaKnown RBP6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 OPRK1P41145 380 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 HTR2BP41595 481 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 AP3S2P59780 193 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 C2orf83Q53S99 150 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 ST8SIA2Q92186 375 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 GGTLC1Q9BX51 225 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 SRRQ9GZT4 340 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 VSIRQ9H7M9 311 aa6.52□□□□□ -1.37
SNRPA1-206ENST00000558059 SHPKQ9UHJ6 478 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms