RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 STPG3Q8N7X2 389 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 OR10G4Q8NGN3 311 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 OR10G9Q8NGN4 311 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 OR10G7Q8NGN6 311 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 OTOGQ6ZRI0 2925 aa16.08■□□□□ 0.17
SNRPA1-205ENST00000558036 FGF8P55075 233 aaPredicted RBP16.08■□□□□ 0.16
SNRPA1-205ENST00000558036 DEFA5Q01523 94 aa16.08■□□□□ 0.16
SNRPA1-205ENST00000558036 SLC25A22Q9H936 323 aa16.08■□□□□ 0.16
SNRPA1-205ENST00000558036 ACANP16112 2415 aa16.08■□□□□ 0.16
SNRPA1-205ENST00000558036 RAB31Q13636 194 aa16.07■□□□□ 0.16
SNRPA1-205ENST00000558036 C9orf152Q5JTZ5 239 aa16.07■□□□□ 0.16
SNRPA1-205ENST00000558036 DPPA3Q6W0C5 159 aa16.07■□□□□ 0.16
SNRPA1-205ENST00000558036 BPIFCQ8NFQ6 507 aa16.07■□□□□ 0.16
SNRPA1-205ENST00000558036 TMUB1Q9BVT8 246 aa16.07■□□□□ 0.16
SNRPA1-205ENST00000558036 CRYGCP07315 174 aa16.07■□□□□ 0.16
SNRPA1-205ENST00000558036 BPIFB3P59826 476 aa16.07■□□□□ 0.16
SNRPA1-205ENST00000558036 B2MP61769 119 aa16.07■□□□□ 0.16
SNRPA1-205ENST00000558036 FAM122CQ6P4D5 195 aa16.07■□□□□ 0.16
SNRPA1-205ENST00000558036 GSX1Q9H4S2 264 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-205ENST00000558036 S4R3C0 116 aa16.07■□□□□ 0.16
SNRPA1-205ENST00000558036 NPIPB5A8MRT5 1133 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 G3V318 75 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 I3L2K1 104 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 M6PRP20645 277 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 ZNF90Q03938 601 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 TOR2AQ5JU69 321 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 IL34Q6ZMJ4 242 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 TTC9CQ8N5M4 171 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 SGMS2Q8NHU3 365 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 LINC00527Q9UJ94 153 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 SLC45A2Q9UMX9 530 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 MYO9AB2RTY4 2548 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 CORTO00230 105 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 UNQ5815/PRO19632Q6UWF5 114 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 EIF4E3Q8N5X7 224 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 ZNF48Q96MX3 618 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 FANCD2OSQ96PS1 177 aa16.06■□□□□ 0.16
SNRPA1-205ENST00000558036 IGKV1D-37A0A075B6S9 117 aa16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 ZFP92A6NM28 416 aa16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 LINC00869P0C866 280 aa16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 RPL29P47914 159 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 BLCAPP62952 87 aa16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 PRR20EP86478 221 aa16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 PRR20CP86479 221 aa16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 PRR20DP86480 221 aa16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 PRR20BP86481 221 aa16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 PRR20AP86496 221 aa16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 ETFRF1Q6IPR1 90 aa16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 SLC39A9Q9NUM3 307 aa16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 SONP18583 2426 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-205ENST00000558036 RAB19A4D1S5 217 aa16.04■□□□□ 0.16
SNRPA1-205ENST00000558036 K7EIM0 57 aa16.04■□□□□ 0.16
SNRPA1-205ENST00000558036 MBP02144 154 aa16.04■□□□□ 0.16
SNRPA1-205ENST00000558036 KRTAP1-1Q07627 177 aa16.04■□□□□ 0.16
SNRPA1-205ENST00000558036 ACOT6Q3I5F7 207 aaPredicted RBP16.04■□□□□ 0.16
SNRPA1-205ENST00000558036 Q6ZS46 218 aa16.04■□□□□ 0.16
SNRPA1-205ENST00000558036 NARS2Q96I59 477 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-205ENST00000558036 IER3P46695 156 aa16.04■□□□□ 0.16
SNRPA1-205ENST00000558036 RAB24Q969Q5 203 aa16.04■□□□□ 0.16
SNRPA1-205ENST00000558036 PITPNC1Q9UKF7 332 aa16.04■□□□□ 0.16
SNRPA1-205ENST00000558036 IGLV11-55A0A075B6I3 123 aa16.03■□□□□ 0.16
SNRPA1-205ENST00000558036 MAP1LC3B2A6NCE7 125 aa16.03■□□□□ 0.16
SNRPA1-205ENST00000558036 SPNS3Q6ZMD2 512 aa16.03■□□□□ 0.16
SNRPA1-205ENST00000558036 TMEM116Q8NCL8 245 aa16.03■□□□□ 0.16
SNRPA1-205ENST00000558036 LINC00052Q96N35 136 aa16.03■□□□□ 0.16
SNRPA1-205ENST00000558036 MAP1LC3BQ9GZQ8 125 aa16.03■□□□□ 0.16
SNRPA1-205ENST00000558036 C9orf139Q6ZV77 190 aa16.03■□□□□ 0.16
SNRPA1-205ENST00000558036 CUBNO60494 3623 aa16.03■□□□□ 0.16
SNRPA1-205ENST00000558036 OR2J3O76001 311 aa16.02■□□□□ 0.16
SNRPA1-205ENST00000558036 CYP2G1PQ6ZSU1 146 aa16.02■□□□□ 0.16
SNRPA1-205ENST00000558036 THAP8Q8NA92 274 aa16.02■□□□□ 0.16
SNRPA1-205ENST00000558036 MBD3L1Q8WWY6 194 aa16.02■□□□□ 0.16
SNRPA1-205ENST00000558036 ACTR3CQ9C0K3 210 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-205ENST00000558036 TREM1Q9NP99 234 aa16.02■□□□□ 0.16
SNRPA1-205ENST00000558036 KCNIP2Q9NS61 270 aa16.02■□□□□ 0.16
SNRPA1-205ENST00000558036 NUDT19A8MXV4 375 aa16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 CDC34P49427 236 aaPredicted RBP16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 OR1L6Q8NGR2 347 aa16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 FAM210AQ96ND0 272 aa16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 RARRES2Q99969 163 aa16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 EIF5A2Q9GZV4 153 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 SEPSECSQ9HD40 501 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 TCRBV4S1A1TA0A5B7 111 aa16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 C9JQL5 133 aa16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 CYB5BO43169 146 aa16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 SPATA31B1PQ5VZV4 182 aa16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 SCRT1Q9BWW7 348 aa16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 TMPRSS5Q9H3S3 457 aa16.01■□□□□ 0.15
SNRPA1-205ENST00000558036 CTXND1A0A1B0GTU2 59 aa16■□□□□ 0.15
SNRPA1-205ENST00000558036 SOX15O60248 233 aa16■□□□□ 0.15
SNRPA1-205ENST00000558036 NDUFB8O95169 186 aa16■□□□□ 0.15
SNRPA1-205ENST00000558036 IGHV3-23P01764 117 aa16■□□□□ 0.15
SNRPA1-205ENST00000558036 GUK1Q16774 197 aa16■□□□□ 0.15
SNRPA1-205ENST00000558036 HAGHQ16775 308 aa16■□□□□ 0.15
SNRPA1-205ENST00000558036 FAM110DQ8TAY7 271 aaPredicted RBP16■□□□□ 0.15
SNRPA1-205ENST00000558036 ZNF355PQ9NSJ1 428 aa16■□□□□ 0.15
SNRPA1-205ENST00000558036 TRAV1-1A0A0B4J248 108 aa16■□□□□ 0.15
SNRPA1-205ENST00000558036 A0A1W2PPV4 95 aa16■□□□□ 0.15
SNRPA1-205ENST00000558036 HOXA3O43365 443 aaPredicted RBP16■□□□□ 0.15
SNRPA1-205ENST00000558036 HBE1P02100 147 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms