RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 VN1R17PQ8TDU5 208 aa6.9□□□□□ -1.3
CHD8-214ENST00000557727 OR4C12Q96R67 309 aa6.9□□□□□ -1.3
CHD8-214ENST00000557727 PDCD10Q9BUL8 212 aa6.9□□□□□ -1.3
CHD8-214ENST00000557727 KRTAP4-11Q9BYQ6 195 aa6.9□□□□□ -1.3
CHD8-214ENST00000557727 PEF1Q9UBV8 284 aaKnown RBP6.9□□□□□ -1.3
CHD8-214ENST00000557727 CACFD1Q9UGQ2 172 aa6.9□□□□□ -1.3
CHD8-214ENST00000557727 ALG5Q9Y673 324 aa6.9□□□□□ -1.3
CHD8-214ENST00000557727 PMS2P5A8MQ11 134 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 CEBPZOSA8MTT3 80 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 LINC01619G3V211 115 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 SIX6O95475 246 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 MT-CO2P00403 227 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 IFNA21P01568 189 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 IGHV3-48P01763 117 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 IAPPP10997 89 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 NPY1RP25929 384 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 HOXD3P31249 432 aaPredicted RBP6.89□□□□□ -1.31
CHD8-214ENST00000557727 HTR2BP41595 481 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 POLR2GP62487 172 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHD8-214ENST00000557727 KLF5Q13887 457 aaPredicted RBP6.89□□□□□ -1.31
CHD8-214ENST00000557727 IL34Q6ZMJ4 242 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 C1QL4Q86Z23 238 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 DLX4Q92988 240 aaPredicted RBP6.89□□□□□ -1.31
CHD8-214ENST00000557727 CXorf58Q96LI9 332 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 C2orf50Q96LR7 162 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 ATP6V0BQ99437 205 aa6.89□□□□□ -1.31
CHD8-214ENST00000557727 HEYLQ9NQ87 328 aaPredicted RBP6.89□□□□□ -1.31
CHD8-214ENST00000557727 TRBV7-1A0A0A6YYK4 115 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 K7EPK0 472 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 SSNA1O43805 119 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 PF4P02776 101 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 CTSGP08311 255 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 OR8U8P0C7N1 319 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 CXCL3P19876 107 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 GPR183P32249 361 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 SNCAP37840 140 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 NKX2-1P43699 371 aaPredicted RBP6.88□□□□□ -1.31
CHD8-214ENST00000557727 CLEC19AQ6UXS0 136 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 ADAMTSL5Q6ZMM2 481 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 UXS1Q8NBZ7 420 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 DCUN1D4Q92564 292 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 EEF1AKMT3Q96AZ1 226 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 CHRDL1Q9BU40 450 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 RANGRFQ9HD47 186 aaPredicted RBP6.88□□□□□ -1.31
CHD8-214ENST00000557727 C21orf62Q9NYP8 219 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 THYN1Q9P016 225 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 U3KQ87 197 aa6.88□□□□□ -1.31
CHD8-214ENST00000557727 OR2T8A6NH00 312 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 H0YIZ8 118 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 H3BP45 60 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 WRBO00258 174 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 GOSR2O14653 212 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 TGOLN2O43493 480 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 SSSCA1O60232 199 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 MED6O75586 246 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 CCNKO75909 580 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 CLEC3BP05452 202 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 EDN2P20800 178 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 RAB32Q13637 225 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 PRSS54Q6PEW0 395 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 TMEM14EPQ6UXP3 125 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 HAPLN4Q86UW8 402 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 OR11H7Q8NGC8 314 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 RNASEH2CQ8TDP1 164 aaKnown RBP6.87□□□□□ -1.31
CHD8-214ENST00000557727 SMIM8Q96KF7 97 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 ZNF436Q9C0F3 470 aaPredicted RBP6.87□□□□□ -1.31
CHD8-214ENST00000557727 HIPK2Q9H2X6 1198 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 ENY2Q9NPA8 101 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 ZC4H2Q9NQZ6 224 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 GSKIPQ9P0R6 139 aa6.87□□□□□ -1.31
CHD8-214ENST00000557727 C5orf51A6NDU8 294 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 FAM25EA8MYX2 175 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 G3V4G9 280 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 CORTO00230 105 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 CYB5BO43169 146 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 OR2C1O95371 312 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 IFNA10P01566 189 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 IGKV1-17P01599 117 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 IGLL1P15814 213 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 ZP3P21754 424 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 ARL3P36405 182 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 SUB1P53999 127 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHD8-214ENST00000557727 ATP5IP56385 69 aaPredicted RBP6.86□□□□□ -1.31
CHD8-214ENST00000557727 SYNJ2BPP57105 145 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 CD69Q07108 199 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 ARL16Q0P5N6 197 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 FCN2Q15485 313 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 FAM209BQ5JX69 171 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 KPRPQ5T749 579 aaPredicted RBP6.86□□□□□ -1.31
CHD8-214ENST00000557727 ACSM6Q6P461 480 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 UNQ9165/PRO28630Q6UXU0 137 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 GSG1LQ6UXU4 331 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 GPHB5Q86YW7 130 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 TMEM116Q8NCL8 245 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 OR4X1Q8NH49 305 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 DPF1Q92782 380 aa6.86□□□□□ -1.31
CHD8-214ENST00000557727 PINX1Q96BK5 328 aaKnown RBP6.86□□□□□ -1.31
CHD8-214ENST00000557727 BSCL2Q96G97 398 aaPredicted RBP6.86□□□□□ -1.31
CHD8-214ENST00000557727 CIB3Q96Q77 187 aaPredicted RBP6.86□□□□□ -1.31
CHD8-214ENST00000557727 TXN2Q99757 166 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms