RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 Q56UQ5 140 aa10.49□□□□□ -0.73
SHMT2-234ENST00000557703 UXS1Q8NBZ7 420 aa10.49□□□□□ -0.73
SHMT2-234ENST00000557703 MARC2Q969Z3 335 aa10.49□□□□□ -0.73
SHMT2-234ENST00000557703 OR10C1Q96KK4 312 aa10.49□□□□□ -0.73
SHMT2-234ENST00000557703 OR4C12Q96R67 309 aa10.49□□□□□ -0.73
SHMT2-234ENST00000557703 ZNF436Q9C0F3 470 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-234ENST00000557703 C7orf66A4D0T2 115 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 C5orf51A6NDU8 294 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 MPTX1A8MV57 137 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 A8MWP6 167 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 CLN5O75503 358 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 TRBV12-3P01733 135 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 IFNA4P05014 189 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 CTSGP08311 255 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 IGLL1P15814 213 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 PVALBP20472 110 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-234ENST00000557703 GPR183P32249 361 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 EGFEM1PQ0D2K5 195 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 OR2K2Q8NGT1 345 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 PINX1Q96BK5 328 aaKnown RBP10.48□□□□□ -0.73
SHMT2-234ENST00000557703 NMES1Q9C002 83 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 GSKIPQ9P0R6 139 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 UFC1Q9Y3C8 167 aa10.48□□□□□ -0.73
SHMT2-234ENST00000557703 STRAPQ9Y3F4 350 aaKnown RBP10.48□□□□□ -0.73
SHMT2-234ENST00000557703 OR2T8A6NH00 312 aa10.47□□□□□ -0.73
SHMT2-234ENST00000557703 F8W735 103 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-234ENST00000557703 K7EMT4 169 aa10.47□□□□□ -0.73
SHMT2-234ENST00000557703 TSC22D2O75157 780 aa10.47□□□□□ -0.73
SHMT2-234ENST00000557703 OR2C1O95371 312 aa10.47□□□□□ -0.73
SHMT2-234ENST00000557703 SYNJ2BPP57105 145 aa10.47□□□□□ -0.73
SHMT2-234ENST00000557703 DEFA5Q01523 94 aa10.47□□□□□ -0.73
SHMT2-234ENST00000557703 CD69Q07108 199 aa10.47□□□□□ -0.73
SHMT2-234ENST00000557703 TECRQ9NZ01 308 aaKnown RBP10.47□□□□□ -0.73
SHMT2-234ENST00000557703 C15orf62A8K5M9 175 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 FAM25EA8MYX2 175 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 PPP5D1E7EU14 171 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 FNDC10F2Z333 226 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 TMEM50AO95807 157 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 CD5P06127 495 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 FABP1P07148 127 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 IL15RAQ13261 267 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 BEAN1Q3B7T3 259 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 OXLD1Q5BKU9 147 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 UBAC2Q8NBM4 344 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 ASB13Q8WXK3 278 aa10.46□□□□□ -0.73
SHMT2-234ENST00000557703 FNDC4Q9H6D8 234 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-234ENST00000557703 DAZ1Q9NQZ3 744 aaKnown RBP10.46□□□□□ -0.73
SHMT2-234ENST00000557703 CMYA5Q8N3K9 4069 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 SSNA1O43805 119 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 SAP30O75446 220 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 NXPH3O95157 252 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 IGHV3-23P01764 117 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 MBPP02686 304 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-234ENST00000557703 RLN2P04090 185 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 BMI1P35226 326 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 YPEL3P61236 119 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-234ENST00000557703 POLR2GP62487 172 aaKnown RBP eCLIP10.45□□□□□ -0.74
SHMT2-234ENST00000557703 PRSS54Q6PEW0 395 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 ZNF600Q6ZNG1 722 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 OR1S2Q8NGQ3 325 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 TMEM170AQ8WVE7 144 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 TMEM190Q8WZ59 177 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 GINS3Q9BRX5 216 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 GGACTQ9BVM4 153 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 MAGT1Q9H0U3 335 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 PSENENQ9NZ42 101 aa10.45□□□□□ -0.74
SHMT2-234ENST00000557703 MRPL27Q9P0M9 148 aaKnown RBP10.45□□□□□ -0.74
SHMT2-234ENST00000557703 G3V4G9 280 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 L7N2F9 121 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 CFDP00746 253 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-234ENST00000557703 PET100P0DJ07 73 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 C8orf88P0DMB2 117 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 IAPPP10997 89 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 ADMP35318 185 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 VAMP2P63027 116 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 OXA1LQ15070 435 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 SPANXN5Q5MJ07 72 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 IL34Q6ZMJ4 242 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 SLC16A13Q7RTY0 426 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 SLC35E1Q96K37 410 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 CHRDL1Q9BU40 450 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 S4R3C0 116 aa10.44□□□□□ -0.74
SHMT2-234ENST00000557703 IGHV3-21A0A0B4J1V1 117 aa10.43□□□□□ -0.74
SHMT2-234ENST00000557703 ZNF320A2RRD8 509 aa10.43□□□□□ -0.74
SHMT2-234ENST00000557703 C2orf70A6NJV1 201 aa10.43□□□□□ -0.74
SHMT2-234ENST00000557703 CCSO14618 274 aa10.43□□□□□ -0.74
SHMT2-234ENST00000557703 SSSCA1O60232 199 aa10.43□□□□□ -0.74
SHMT2-234ENST00000557703 IGLV1-51P01701 117 aa10.43□□□□□ -0.74
SHMT2-234ENST00000557703 CSN3P07498 182 aa10.43□□□□□ -0.74
SHMT2-234ENST00000557703 TMEM14EPQ6UXP3 125 aa10.43□□□□□ -0.74
SHMT2-234ENST00000557703 OR10P1Q8NGE3 313 aa10.43□□□□□ -0.74
SHMT2-234ENST00000557703 RCL1Q9Y2P8 373 aaKnown RBP10.43□□□□□ -0.74
SHMT2-234ENST00000557703 TRAV25A0A0B4J276 109 aa10.42□□□□□ -0.74
SHMT2-234ENST00000557703 PRSS46E5RG02 174 aa10.42□□□□□ -0.74
SHMT2-234ENST00000557703 K7EPK0 472 aa10.42□□□□□ -0.74
SHMT2-234ENST00000557703 SCGB1D2O95969 90 aa10.42□□□□□ -0.74
SHMT2-234ENST00000557703 IGLC1P0CG04 106 aa10.42□□□□□ -0.74
SHMT2-234ENST00000557703 CBLN1P23435 193 aa10.42□□□□□ -0.74
SHMT2-234ENST00000557703 OR10J1P30954 320 aa10.42□□□□□ -0.74
SHMT2-234ENST00000557703 S100A7P31151 101 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms