RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 BET1LQ9NYM9 111 aa9.67□□□□□ -0.86
TMEM260-215ENST00000557626 METTL1Q9UBP6 276 aaKnown RBP9.67□□□□□ -0.86
TMEM260-215ENST00000557626 SHPKQ9UHJ6 478 aa9.67□□□□□ -0.86
TMEM260-215ENST00000557626 NSG2Q9Y328 171 aa9.67□□□□□ -0.86
TMEM260-215ENST00000557626 SNRPGP15A8MWD9 76 aa9.66□□□□□ -0.86
TMEM260-215ENST00000557626 PRAF2O60831 178 aa9.66□□□□□ -0.86
TMEM260-215ENST00000557626 KBTBD11O94819 623 aa9.66□□□□□ -0.86
TMEM260-215ENST00000557626 HRASP01112 189 aa9.66□□□□□ -0.86
TMEM260-215ENST00000557626 IFNA10P01566 189 aa9.66□□□□□ -0.86
TMEM260-215ENST00000557626 PRSS8Q16651 343 aa9.66□□□□□ -0.86
TMEM260-215ENST00000557626 C10orf55Q5SWW7 151 aa9.66□□□□□ -0.86
TMEM260-215ENST00000557626 C12orf45Q8N5I9 185 aaPredicted RBP9.66□□□□□ -0.86
TMEM260-215ENST00000557626 OR2A7Q96R45 310 aa9.66□□□□□ -0.86
TMEM260-215ENST00000557626 RNF126Q9BV68 326 aa9.66□□□□□ -0.86
TMEM260-215ENST00000557626 KIR2DL5BA0A0G2JN68 375 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 KIR2DL5BA0A0G2JPC4 375 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 A0A1B0GVG6 124 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 DHFRP00374 187 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 CX3CL1P78423 397 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 AARDQ4LEZ3 155 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 GGNBP1Q5YKI7 109 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 UNQ5815/PRO19632Q6UWF5 114 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 PPP1R27Q86WC6 154 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 KIR2DL5AQ8N109 375 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 KIR2DL5BQ8NHK3 375 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 LSM10Q969L4 123 aaKnown RBP9.65□□□□□ -0.86
TMEM260-215ENST00000557626 OR10C1Q96KK4 312 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 CLCC1Q96S66 551 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 RARRES2Q99969 163 aa9.65□□□□□ -0.86
TMEM260-215ENST00000557626 TRAV10A0A0B4J240 114 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 A0A0G2JLM5 398 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 CCSO14618 274 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 PITX3O75364 302 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 CA2P00918 260 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 HOXB5P09067 269 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 ANXA3P12429 323 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 HLA-GP17693 338 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 FCGR2BP31994 310 aaPredicted RBP9.64□□□□□ -0.87
TMEM260-215ENST00000557626 SRPXP78539 464 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 CBX3Q13185 183 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 IL15RAQ13261 267 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 VMA21Q3ZAQ7 101 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 TM4SF20Q53R12 229 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 UBE2DNLQ8IWF7 75 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 LYPD1Q8N2G4 141 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 DMBX1Q8NFW5 382 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 TMEM14BQ9NUH8 114 aa9.64□□□□□ -0.87
TMEM260-215ENST00000557626 TECRQ9NZ01 308 aaKnown RBP9.64□□□□□ -0.87
TMEM260-215ENST00000557626 PEF1Q9UBV8 284 aaKnown RBP9.64□□□□□ -0.87
TMEM260-215ENST00000557626 DUXBA0A1W2PPF3 345 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 DEFB4AO15263 64 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 CREBL2O60519 120 aaPredicted RBP9.63□□□□□ -0.87
TMEM260-215ENST00000557626 SIX6O95475 246 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 TRBV12-3P01733 135 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 AKR1C2P52895 323 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 OR2B8PP59922 312 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 ZNF562Q6V9R5 426 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 H2BFWTQ7Z2G1 175 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 FAM219AQ8IW50 185 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 OR4A5Q8NH83 315 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 COQ8AQ8NI60 647 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 PHB2Q99623 299 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 QTRT1Q9BXR0 403 aaKnown RBP9.63□□□□□ -0.87
TMEM260-215ENST00000557626 GPN1Q9HCN4 374 aaPredicted RBP9.63□□□□□ -0.87
TMEM260-215ENST00000557626 CACNG5Q9UF02 275 aa9.63□□□□□ -0.87
TMEM260-215ENST00000557626 TEX50A0A1B0GTY4 177 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 C15orf61A6NNL5 157 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 TEX22C9J3V5 150 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 AMBPP02760 352 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 CXCL3P19876 107 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 H2BFSP57053 126 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 ERVK-16P61578 105 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 RPL8P62917 257 aaKnown RBP9.62□□□□□ -0.87
TMEM260-215ENST00000557626 FCN2Q15485 313 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 AKIRIN2Q53H80 203 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 UXS1Q8NBZ7 420 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 OR11H7Q8NGC8 314 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 TMED3Q9Y3Q3 217 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 SELENOKQ9Y6D0 94 aa9.62□□□□□ -0.87
TMEM260-215ENST00000557626 KRTAP9-6A0A140TA67 174 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 A0A1B0GU03 582 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 ST8SIA3O43173 380 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 SCAF4O95104 1147 aaKnown RBP9.61□□□□□ -0.87
TMEM260-215ENST00000557626 IFNA21P01568 189 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 IFNA17P01571 189 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 FGF2P09038 288 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 SULT1A3P0DMM9 295 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 SULT1A4P0DMN0 295 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 FXYD3Q14802 87 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 MMD2Q8IY49 270 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 TMEM61Q8N0U2 210 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 LFNGQ8NES3 379 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 OR4D5Q8NGN0 318 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 VSTM2AQ8TAG5 236 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 CHAC2Q8WUX2 184 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 RRNAD1Q96FB5 475 aaKnown RBP9.61□□□□□ -0.87
TMEM260-215ENST00000557626 AIFM2Q9BRQ8 373 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 FAM103A1Q9BTL3 118 aaKnown RBP9.61□□□□□ -0.87
TMEM260-215ENST00000557626 KRTAP9-2Q9BYQ4 174 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 NDUFA4L2Q9NRX3 87 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms