RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TMEM68Q96MH6 324 aa9.88□□□□□ -0.83
SHMT2-233ENST00000557529 FAM103A1Q9BTL3 118 aaKnown RBP9.88□□□□□ -0.83
SHMT2-233ENST00000557529 C19orf24Q9BVV8 132 aa9.88□□□□□ -0.83
SHMT2-233ENST00000557529 PITPNC1Q9UKF7 332 aa9.88□□□□□ -0.83
SHMT2-233ENST00000557529 HELZ2Q9BYK8 2649 aaKnown RBP9.87□□□□□ -0.83
SHMT2-233ENST00000557529 CRYBG3Q68DQ2 2970 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 CENPEQ02224 2701 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 PLXNB1O43157 2135 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 NAV3Q8IVL0 2385 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 TCRBV4S1A1TA0A5B7 111 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 ZFP92A6NM28 416 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 I3L2K1 104 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 M0QZK8 103 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 SFTA3P0C7M3 94 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 LINC00869P0C866 280 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 TAGLN2P37802 199 aaKnown RBP9.87□□□□□ -0.83
SHMT2-233ENST00000557529 FGF8P55075 233 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-233ENST00000557529 RHOBP62745 196 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 KHDC3LQ587J8 217 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 ZNF506Q5JVG8 444 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 ASPHD1Q5U4P2 390 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 RBMS3Q6XE24 437 aaKnown RBP9.87□□□□□ -0.83
SHMT2-233ENST00000557529 C19orf35Q6ZS72 473 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 SGMS2Q8NHU3 365 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 TRGV9Q99603 122 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 SEC11CQ9BY50 192 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 DMRT1Q9Y5R6 373 aa9.87□□□□□ -0.83
SHMT2-233ENST00000557529 A6NDX4 124 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 F8W036 122 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 H3BUX3 64 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 PPT1P50897 306 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 HAGHQ16775 308 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 GCSAMLQ5JQS6 135 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 C10orf91Q5T1B1 145 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 C16orf82Q7Z2V1 217 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 OR4X1Q8NH49 305 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 NANPQ8TBE9 248 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 RNF2Q99496 336 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 HSPB9Q9BQS6 159 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 TNFRSF19Q9NS68 423 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 THYN1Q9P016 225 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 GNG13Q9P2W3 67 aa9.86□□□□□ -0.83
SHMT2-233ENST00000557529 CARHSP1Q9Y2V2 147 aaKnown RBP9.86□□□□□ -0.83
SHMT2-233ENST00000557529 IGLV11-55A0A075B6I3 123 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 IGKV1D-37A0A075B6S9 117 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 LOC102723971A0A1B0GUV8 181 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 FSHBP01225 129 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 IGHV3-48P01763 117 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 APOC3P02656 99 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 HSPB1P04792 205 aaKnown RBP9.85□□□□□ -0.83
SHMT2-233ENST00000557529 FABP1P07148 127 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 BCL2P10415 239 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 EGR2P11161 476 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-233ENST00000557529 HIST1H1BP16401 226 aaKnown RBP9.85□□□□□ -0.83
SHMT2-233ENST00000557529 PSMB3P49720 205 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 TMEM219Q86XT9 240 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 TEX29Q8N6K0 151 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 FAM110DQ8TAY7 271 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-233ENST00000557529 GATAD1Q8WUU5 269 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 FOXC2Q99958 501 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 RARRES2Q99969 163 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 SLC35B3Q9H1N7 401 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 MANBALQ9NQG1 85 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 MRPL36Q9P0J6 103 aaKnown RBP9.85□□□□□ -0.83
SHMT2-233ENST00000557529 CELSR2Q9HCU4 2923 aa9.85□□□□□ -0.83
SHMT2-233ENST00000557529 C9JQL5 133 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 K7EIM0 57 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 ATP6V0E1O15342 81 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 HMGB3O15347 200 aaKnown RBP9.84□□□□□ -0.83
SHMT2-233ENST00000557529 CXorf1O96002 111 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 STAG3L2P0CL84 134 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 STAG3L3P0CL85 134 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 ICAM4Q14773 271 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 KLK9Q2XQG4 91 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 UNQ5815/PRO19632Q6UWF5 114 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 C9orf139Q6ZV77 190 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 SLC35E3Q7Z769 313 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 SVBPQ8N300 66 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 OR1L4Q8NGR5 311 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 FANCD2OSQ96PS1 177 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 PFDN5Q99471 154 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 MRPL32Q9BYC8 188 aaKnown RBP9.84□□□□□ -0.83
SHMT2-233ENST00000557529 VAX2Q9UIW0 290 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 KLK9Q9UKQ9 250 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 FUT9Q9Y231 359 aa9.84□□□□□ -0.83
SHMT2-233ENST00000557529 IGHV3-21A0A0B4J1V1 117 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 NDUFS6O75380 124 aaKnown RBP9.83□□□□□ -0.84
SHMT2-233ENST00000557529 CLN5O75503 358 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 OR5G3P0C626 314 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 ADCYAP1P18509 176 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 NPBWR1P48145 328 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 TAS2R45P59539 299 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 AKIRIN2Q53H80 203 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 FAM78BQ5VT40 261 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 WFDC11Q8NEX6 87 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 OR5T1Q8NG75 326 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 RXFP4Q8TDU9 374 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 ZNF48Q96MX3 618 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-233ENST00000557529 TMUB1Q9BVT8 246 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 DNAJC4Q9NNZ3 241 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 461.3 ms