RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 SLC16A13Q7RTY0 426 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 UXS1Q8NBZ7 420 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 COQ8AQ8NI60 647 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 C20orf24Q9BUV8 137 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 ZMAT4Q9H898 229 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 DAZ1Q9NQZ3 744 aaKnown RBP10.49□□□□□ -0.73
VPS33B-206ENST00000557358 SHPKQ9UHJ6 478 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 DMRT1Q9Y5R6 373 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 IGHV3-35A0A0C4DH35 117 aa10.48□□□□□ -0.73
VPS33B-206ENST00000557358 DUXBA0A1W2PPF3 345 aa10.48□□□□□ -0.73
VPS33B-206ENST00000557358 YIF1AO95070 293 aa10.48□□□□□ -0.73
VPS33B-206ENST00000557358 OPRK1P41145 380 aa10.48□□□□□ -0.73
VPS33B-206ENST00000557358 MFAP2P55001 183 aa10.48□□□□□ -0.73
VPS33B-206ENST00000557358 DEFB114Q30KQ6 69 aa10.48□□□□□ -0.73
VPS33B-206ENST00000557358 LAMTOR1Q6IAA8 161 aa10.48□□□□□ -0.73
VPS33B-206ENST00000557358 C12orf45Q8N5I9 185 aaPredicted RBP10.48□□□□□ -0.73
VPS33B-206ENST00000557358 MITD1Q8WV92 249 aa10.48□□□□□ -0.73
VPS33B-206ENST00000557358 GPR146Q96CH1 333 aa10.48□□□□□ -0.73
VPS33B-206ENST00000557358 ZNF436Q9C0F3 470 aaPredicted RBP10.48□□□□□ -0.73
VPS33B-206ENST00000557358 PRR13Q9NZ81 148 aa10.48□□□□□ -0.73
VPS33B-206ENST00000557358 TRAV25A0A0B4J276 109 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 TMEM213A2RRL7 107 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 I3L2K1 104 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 SSNA1O43805 119 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 FCGR2BP31994 310 aaPredicted RBP10.47□□□□□ -0.73
VPS33B-206ENST00000557358 CD81P60033 236 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 SMCO1Q147U7 214 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 TM4SF20Q53R12 229 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 LRTM2Q8N967 370 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 OR1S1Q8NH92 325 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 LHFPL5Q8TAF8 219 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 TMEM190Q8WZ59 177 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 GINS3Q9BRX5 216 aa10.47□□□□□ -0.73
VPS33B-206ENST00000557358 A0A0G2JRQ6 117 aa10.46□□□□□ -0.73
VPS33B-206ENST00000557358 C15orf62A8K5M9 175 aa10.46□□□□□ -0.73
VPS33B-206ENST00000557358 K7EMT4 169 aa10.46□□□□□ -0.73
VPS33B-206ENST00000557358 FRMD6-AS1P0C7T7 363 aa10.46□□□□□ -0.73
VPS33B-206ENST00000557358 IGHV4-30-4P0DP06 118 aa10.46□□□□□ -0.73
VPS33B-206ENST00000557358 AARDQ4LEZ3 155 aa10.46□□□□□ -0.73
VPS33B-206ENST00000557358 ETFRF1Q6IPR1 90 aa10.46□□□□□ -0.73
VPS33B-206ENST00000557358 ASCL2Q99929 193 aa10.46□□□□□ -0.73
VPS33B-206ENST00000557358 U3KQK5 164 aa10.46□□□□□ -0.73
VPS33B-206ENST00000557358 TRAV30A0A087WSZ9 112 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 A0A1B0GU03 582 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 A8MZ25 164 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 MED6O75586 246 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 IFNA10P01566 189 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 RNASE2P10153 161 aaKnown RBP10.45□□□□□ -0.74
VPS33B-206ENST00000557358 BTNL8Q6UX41 500 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 UNQ9165/PRO28630Q6UXU0 137 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 Q6ZRM9 215 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 SLC24A4Q8NFF2 622 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 RNASEH2CQ8TDP1 164 aaKnown RBP10.45□□□□□ -0.74
VPS33B-206ENST00000557358 CACNG8Q8WXS5 425 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 NARS2Q96I59 477 aaKnown RBP10.45□□□□□ -0.74
VPS33B-206ENST00000557358 NEURL2Q9BR09 285 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 CHRDL1Q9BU40 450 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 MED28Q9H204 178 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 U3KQ87 197 aa10.45□□□□□ -0.74
VPS33B-206ENST00000557358 hCG_2014768A0A024R1R8 64 aa10.44□□□□□ -0.74
VPS33B-206ENST00000557358 IZUMO1RA6ND01 250 aa10.44□□□□□ -0.74
VPS33B-206ENST00000557358 CD5P06127 495 aa10.44□□□□□ -0.74
VPS33B-206ENST00000557358 CTSGP08311 255 aa10.44□□□□□ -0.74
VPS33B-206ENST00000557358 C8orf88P0DMB2 117 aa10.44□□□□□ -0.74
VPS33B-206ENST00000557358 SLC25A4P12235 298 aa10.44□□□□□ -0.74
VPS33B-206ENST00000557358 ATP5IP56385 69 aaPredicted RBP10.44□□□□□ -0.74
VPS33B-206ENST00000557358 TNFRSF9Q07011 255 aa10.44□□□□□ -0.74
VPS33B-206ENST00000557358 LYZL2Q7Z4W2 148 aa10.44□□□□□ -0.74
VPS33B-206ENST00000557358 TMED3Q9Y3Q3 217 aa10.44□□□□□ -0.74
VPS33B-206ENST00000557358 TRAV14DV4A0A0A6YYC5 116 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 A0A1B0GVG6 124 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 GOSR2O14653 212 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 ADAP1O75689 374 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 SCAF4O95104 1147 aaKnown RBP10.43□□□□□ -0.74
VPS33B-206ENST00000557358 IFNA21P01568 189 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 IGHV3-48P01763 117 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 HOXB5P09067 269 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 NPY1RP25929 384 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 RRAS2P62070 204 aaPredicted RBP10.43□□□□□ -0.74
VPS33B-206ENST00000557358 RPP30P78346 268 aaKnown RBP10.43□□□□□ -0.74
VPS33B-206ENST00000557358 C2orf83Q53S99 150 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 NMSQ5H8A3 153 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 ADAMTSL5Q6ZMM2 481 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 ZNF600Q6ZNG1 722 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 TMEM61Q8N0U2 210 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 Q8N1Y9 231 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 DTD1Q8TEA8 209 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 WDR89Q96FK6 387 aaPredicted RBP10.43□□□□□ -0.74
VPS33B-206ENST00000557358 WWC2-AS2Q96NR7 200 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 SPAG8Q99932 426 aaPredicted RBP10.43□□□□□ -0.74
VPS33B-206ENST00000557358 TMEM231Q9H6L2 316 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 MGAT4CQ9UBM8 478 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 MLXQ9UH92 298 aa10.43□□□□□ -0.74
VPS33B-206ENST00000557358 ZNF785A8K8V0 405 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 OR11H12B2RN74 326 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 F8W735 103 aaPredicted RBP10.42□□□□□ -0.74
VPS33B-206ENST00000557358 CCSO14618 274 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 CLN5O75503 358 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 NXPH3O95157 252 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 SLC25A6P12236 298 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms