RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 Q96M66 194 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 SPINK14Q6IE38 97 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 AGFG2O95081 481 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 A0A1W2PR80 420 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 FOXL1Q12952 345 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 PMS2CLQ68D20 193 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 SCARF2Q96GP6 870 aaPredicted RBP7.5□□□□□ -1.21
SYNE3-205ENST00000557275 MRPL27Q9P0M9 148 aaKnown RBP7.5□□□□□ -1.21
SYNE3-205ENST00000557275 RNF115Q9Y4L5 304 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 ACYP1P07311 99 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 TRIP6Q15654 476 aaKnown RBP7.49□□□□□ -1.21
SYNE3-205ENST00000557275 ABHD12Q8N2K0 398 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 WNT2BQ93097 391 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 SLC25A39Q9BZJ4 359 aaPredicted RBP7.49□□□□□ -1.21
SYNE3-205ENST00000557275 CEACAM8P31997 349 aaPredicted RBP7.49□□□□□ -1.21
SYNE3-205ENST00000557275 TPTE2P1Q5T6R2 138 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 SMIM14Q96QK8 99 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 AHDC1Q5TGY3 1603 aaPredicted RBP7.49□□□□□ -1.21
SYNE3-205ENST00000557275 TRGV3P03979 118 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 RPRMLQ8N4K4 120 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 TSKUQ8WUA8 353 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 GZMBP10144 247 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 CTGFP29279 349 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 HIST1H2BKO60814 126 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 ZG16O60844 167 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 HIST1H2BJP06899 126 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 HIST1H2BOP23527 126 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 HIST1H2BBP33778 126 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 HIST1H2BDP58876 126 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 HIST1H2BCP62807 126 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 HIST2H2BEQ16778 126 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.49□□□□□ -1.21
SYNE3-205ENST00000557275 HIST1H2BHQ93079 126 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 HIST1H2BNQ99877 126 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 HIST1H2BMQ99879 126 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 IGHV3-21A0A0B4J1V1 117 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 VSIG10L2P0DP72 767 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 C3AR1Q16581 482 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 ZIC4Q8N9L1 334 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 GTSF1LQ9H1H1 148 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 NHSQ6T4R5 1651 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 RNASE4P34096 147 aaKnown RBP7.49□□□□□ -1.21
SYNE3-205ENST00000557275 DCAF12L2Q5VW00 463 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 SSBP3Q9BWW4 388 aaPredicted RBP7.49□□□□□ -1.21
SYNE3-205ENST00000557275 ITLN2Q8WWU7 325 aaPredicted RBP7.49□□□□□ -1.21
SYNE3-205ENST00000557275 ANAPC1Q9H1A4 1944 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 CCL21O00585 134 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 OVOL1O14753 267 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 EVI2AP22794 236 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 PDE6HQ13956 83 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 PLA2G3Q9NZ20 509 aa7.49□□□□□ -1.21
SYNE3-205ENST00000557275 TRGV4A0A0C4DH28 118 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 TGFAP01135 160 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 UMODP07911 640 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 COL9A2Q14055 689 aaPredicted RBP7.48□□□□□ -1.21
SYNE3-205ENST00000557275 Q6ZS52 159 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 MS4A4AQ96JQ5 239 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 WFDC6Q9BQY6 131 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 IFI27L2Q9H2X8 130 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 TMEM131Q92545 1883 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 IGHV5-51A0A0C4DH38 117 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 TMEM187Q14656 261 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 PRR7Q8TB68 274 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 DLL3Q9NYJ7 618 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 KIAA0040Q15053 153 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 WFDC5Q8TCV5 224 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 TMEM126AQ9H061 195 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 YBX2Q9Y2T7 364 aaKnown RBP7.48□□□□□ -1.21
SYNE3-205ENST00000557275 TRBV24-1A0A075B6N3 115 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 TRAV41A0A0B4J266 112 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 MDKP21741 143 aaPredicted RBP7.48□□□□□ -1.21
SYNE3-205ENST00000557275 H2BFSP57053 126 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 LINC01545Q5VT33 79 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 FAM19A2Q8N3H0 131 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 KIAA1551Q9HCM1 1747 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 RLFQ13129 1914 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 IGHV3OR15-7A0A075B7D8 119 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 CD200R1LQ6Q8B3 271 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 TMEM144Q7Z5S9 345 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 PILRBQ9UKJ0 227 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 CCL19Q99731 98 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 C15orf61A6NNL5 157 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 IGHMP01871 453 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 RPL36AP83881 106 aaKnown RBP7.48□□□□□ -1.21
SYNE3-205ENST00000557275 SRSF2Q01130 221 aaKnown RBP7.48□□□□□ -1.21
SYNE3-205ENST00000557275 C1orf194Q5T5A4 169 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 RPL36ALQ969Q0 106 aaKnown RBP7.48□□□□□ -1.21
SYNE3-205ENST00000557275 ERCC8Q13216 396 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 COL9A3Q14050 684 aaPredicted RBP7.48□□□□□ -1.21
SYNE3-205ENST00000557275 F8P00451 2351 aa7.48□□□□□ -1.21
SYNE3-205ENST00000557275 NPIPB3Q92617 1050 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 SHANK3Q9BYB0 1731 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 INS-IGF2F8WCM5 200 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 INSP01308 110 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 CD300CQ08708 224 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 PRR13Q9NZ81 148 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 IGKV1D-42A0A075B6H8 117 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 CT55Q8WUE5 264 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 FBXL15Q9H469 300 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 ARHGAP21Q5T5U3 1957 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms