RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 V9GYH0 126 aa8.98□□□□□ -0.97
SYNE2-226ENST00000557084 F8W735 103 aaPredicted RBP8.97□□□□□ -0.97
SYNE2-226ENST00000557084 K7EMT4 169 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 BMI1P35226 326 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 HTR2BP41595 481 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 KLF9Q13886 244 aaPredicted RBP8.97□□□□□ -0.97
SYNE2-226ENST00000557084 TMEM187Q14656 261 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 TRIQKQ629K1 86 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 Q6ZRM9 215 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 CCDC190Q86UF4 302 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 LGI3Q8N145 548 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 OR52E5Q8NH55 327 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 GPR146Q96CH1 333 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 GALNT14Q96FL9 552 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 TM2D3Q9BRN9 247 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 GINS3Q9BRX5 216 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 HIPK2Q9H2X6 1198 aa8.97□□□□□ -0.97
SYNE2-226ENST00000557084 TRAV14DV4A0A0A6YYC5 116 aa8.96□□□□□ -0.98
SYNE2-226ENST00000557084 RPS10-NUDT3A0A1W2PQS6 291 aa8.96□□□□□ -0.98
SYNE2-226ENST00000557084 NXPH3O95157 252 aa8.96□□□□□ -0.98
SYNE2-226ENST00000557084 RNASE2P10153 161 aaKnown RBP8.96□□□□□ -0.98
SYNE2-226ENST00000557084 VAMP1P23763 118 aa8.96□□□□□ -0.98
SYNE2-226ENST00000557084 DEDD2Q8WXF8 326 aa8.96□□□□□ -0.98
SYNE2-226ENST00000557084 TRIM63Q969Q1 353 aa8.96□□□□□ -0.98
SYNE2-226ENST00000557084 TMEM230Q96A57 120 aa8.96□□□□□ -0.98
SYNE2-226ENST00000557084 SPAG8Q99932 426 aaPredicted RBP8.96□□□□□ -0.98
SYNE2-226ENST00000557084 SLC25A21Q9BQT8 299 aaPredicted RBP8.96□□□□□ -0.98
SYNE2-226ENST00000557084 WFDC10AQ9H1F0 79 aa8.96□□□□□ -0.98
SYNE2-226ENST00000557084 PRR13Q9NZ81 148 aa8.96□□□□□ -0.98
SYNE2-226ENST00000557084 IGHV3-49A0A0A0MS15 119 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 A0A0B4J2A0 478 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 OR4C46A6NHA9 309 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 TSPAN4O14817 238 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 CCR6P51684 374 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 SMCO1Q147U7 214 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 ZNF79Q15937 498 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 TMEM128Q5BJH2 165 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 LYZL2Q7Z4W2 148 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 NOXA1Q86UR1 476 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 TMEM116Q8NCL8 245 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 OR1S1Q8NH92 325 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 RHPN1-AS1Q9BWJ2 59 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 SHPKQ9UHJ6 478 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 SMPXQ9UHP9 88 aa8.95□□□□□ -0.98
SYNE2-226ENST00000557084 IGHV7-4-1A0A0J9YVY3 117 aa8.94□□□□□ -0.98
SYNE2-226ENST00000557084 C3orf84H3BNL1 204 aa8.94□□□□□ -0.98
SYNE2-226ENST00000557084 TMEM50AO95807 157 aa8.94□□□□□ -0.98
SYNE2-226ENST00000557084 IFNA10P01566 189 aa8.94□□□□□ -0.98
SYNE2-226ENST00000557084 SUPT4H1P63272 117 aaKnown RBP8.94□□□□□ -0.98
SYNE2-226ENST00000557084 AARDQ4LEZ3 155 aa8.94□□□□□ -0.98
SYNE2-226ENST00000557084 ZNF600Q6ZNG1 722 aa8.94□□□□□ -0.98
SYNE2-226ENST00000557084 SLC24A4Q8NFF2 622 aa8.94□□□□□ -0.98
SYNE2-226ENST00000557084 OR10C1Q96KK4 312 aa8.94□□□□□ -0.98
SYNE2-226ENST00000557084 NDUFA13Q9P0J0 144 aa8.94□□□□□ -0.98
SYNE2-226ENST00000557084 PUS1Q9Y606 427 aaKnown RBP eCLIP8.94□□□□□ -0.98
SYNE2-226ENST00000557084 HUWE1Q7Z6Z7 4374 aaKnown RBP8.94□□□□□ -0.98
SYNE2-226ENST00000557084 KMT2CQ8NEZ4 4911 aaKnown RBP8.93□□□□□ -0.98
SYNE2-226ENST00000557084 IGHV3OR16-13A0A075B7E8 117 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 TRAV30A0A087WSZ9 112 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 IGHV3-74A0A0B4J1X5 117 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 A0A1B0GU03 582 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 LINC00854A0A1B0GVQ3 168 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 CENPXA8MT69 81 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 CLN5O75503 358 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 SLC25A4P12235 298 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 NPY1RP25929 384 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 RPL11P62913 178 aaKnown RBP8.93□□□□□ -0.98
SYNE2-226ENST00000557084 PAFAH1B2P68402 229 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 TNFRSF9Q07011 255 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 RBMS2Q15434 407 aaKnown RBP8.93□□□□□ -0.98
SYNE2-226ENST00000557084 C2orf83Q53S99 150 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 ETFRF1Q6IPR1 90 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 TOMM20LQ6UXN7 152 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 CENPSQ8N2Z9 138 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 OR4X1Q8NH49 305 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 MUC7Q8TAX7 377 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 RNASEH2CQ8TDP1 164 aaKnown RBP8.93□□□□□ -0.98
SYNE2-226ENST00000557084 DTD1Q8TEA8 209 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 NARS2Q96I59 477 aaKnown RBP8.93□□□□□ -0.98
SYNE2-226ENST00000557084 RNF2Q99496 336 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 SRRQ9GZT4 340 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 TMEM231Q9H6L2 316 aa8.93□□□□□ -0.98
SYNE2-226ENST00000557084 IGKV3-7A0A075B6H7 116 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 LOC102724200A0A096LPH7 203 aaPredicted RBP8.92□□□□□ -0.98
SYNE2-226ENST00000557084 DUXBA0A1W2PPF3 345 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 RBMY1BA6NDE4 496 aaKnown RBP8.92□□□□□ -0.98
SYNE2-226ENST00000557084 RBMY1EA6NEQ0 496 aaKnown RBP8.92□□□□□ -0.98
SYNE2-226ENST00000557084 NAP1L6A6NFF2 107 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 CHEK1O14757 476 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 IFNA4P05014 189 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 CD5P06127 495 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 RBMY1DP0C7P1 496 aaKnown RBP8.92□□□□□ -0.98
SYNE2-226ENST00000557084 LYL1P12980 280 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 NPPCP23582 126 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 TFPI2P48307 235 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 MLANAQ16655 118 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 BSXQ3C1V8 233 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 NMSQ5H8A3 153 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 PVRIGQ6DKI7 326 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 CITED4Q96RK1 184 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms