RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 PLEKHA3Q9HB20 300 aa4.14□□□□□ -1.75
ATXN3-244ENST00000556898 WFDC1Q9HC57 220 aa4.14□□□□□ -1.75
ATXN3-244ENST00000556898 HEYLQ9NQ87 328 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-244ENST00000556898 MRPL36Q9P0J6 103 aaKnown RBP4.14□□□□□ -1.75
ATXN3-244ENST00000556898 PITPNC1Q9UKF7 332 aa4.14□□□□□ -1.75
ATXN3-244ENST00000556898 ZNF257Q9Y2Q1 563 aa4.14□□□□□ -1.75
ATXN3-244ENST00000556898 TGP01266 2768 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 TET2Q6N021 2002 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-244ENST00000556898 TRAV41A0A0B4J266 112 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 A0A1W2PN81 502 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 FAM90A26D6RGX4 464 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 E5RGE8 158 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 MED6O75586 246 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 CST7O76096 145 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 ACTL6BO94805 426 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 NDUFB8O95169 186 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 IFNA10P01566 189 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 IGHV3-23P01764 117 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 IGHG2P01859 326 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 C1QBP02746 253 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 METTL15P1P0C7V9 234 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 PF4V1P10720 104 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 CTRB1P17538 263 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 RPL12P30050 165 aaKnown RBP4.13□□□□□ -1.75
ATXN3-244ENST00000556898 CHRNA7P36544 502 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 P2RY1P47900 373 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 CAV2P51636 162 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 RPL23AP62750 156 aaKnown RBP4.13□□□□□ -1.75
ATXN3-244ENST00000556898 CYCSP99999 105 aaKnown RBP4.13□□□□□ -1.75
ATXN3-244ENST00000556898 EWSR1Q01844 656 aaKnown RBP eCLIP4.13□□□□□ -1.75
ATXN3-244ENST00000556898 ZFP69Q49AA0 526 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 CTRB2Q6GPI1 263 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 OR8G2PQ6IF36 304 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 TMEM14EPQ6UXP3 125 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 C16orf82Q7Z2V1 217 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 ZNF329Q86UD4 541 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 NOXA1Q86UR1 476 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 C9orf62Q8N4C0 152 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 TMEM252Q8N6L7 170 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 TMEM217Q8N7C4 229 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 SLC24A4Q8NFF2 622 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 OR5B3Q8NH48 314 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 PRSS22Q9GZN4 317 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 ENY2Q9NPA8 101 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 SERTAD4Q9NUC0 356 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 FKBP11Q9NYL4 201 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 TNFSF18Q9UNG2 199 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 RFNGQ9Y644 331 aa4.13□□□□□ -1.75
ATXN3-244ENST00000556898 PKD1L1Q8TDX9 2849 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 PIGBOS1A0A0B4J2F0 54 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 A0A1B0GUS0 222 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 PRSS46E5RG02 174 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 CLDN34H7C241 214 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 TSC22D2O75157 780 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 OR2J3O76001 311 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 RLN2P04090 185 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 CRYGCP07315 174 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 HNRNPCP07910 306 aaKnown RBP eCLIP4.12□□□□□ -1.75
ATXN3-244ENST00000556898 OR8U8P0C7N1 319 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 PVALBP20472 110 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-244ENST00000556898 NPY1RP25929 384 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 PPIFP30405 207 aaKnown RBP4.12□□□□□ -1.75
ATXN3-244ENST00000556898 ERHP84090 104 aaKnown RBP4.12□□□□□ -1.75
ATXN3-244ENST00000556898 CFHR3Q02985 330 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 BSXQ3C1V8 233 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 SLC25A24Q6NUK1 477 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 ZNF546Q86UE3 836 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 STPG2Q8N412 459 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 TTC9CQ8N5M4 171 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 C11orf44Q8N8P7 122 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 OR2T6Q8NHC8 308 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 FAM110DQ8TAY7 271 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-244ENST00000556898 PINX1Q96BK5 328 aaKnown RBP4.12□□□□□ -1.75
ATXN3-244ENST00000556898 RAB40CQ96S21 281 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 NPFFR1Q9GZQ6 430 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 MFFQ9GZY8 342 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 KLK15Q9H2R5 256 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 HIPK2Q9H2X6 1198 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 FNDC4Q9H6D8 234 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-244ENST00000556898 ZNF355PQ9NSJ1 428 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 LYRM2Q9NU23 88 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-244ENST00000556898 FBXL17Q9UF56 701 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 STRAPQ9Y3F4 350 aaKnown RBP4.12□□□□□ -1.75
ATXN3-244ENST00000556898 HSPB11Q9Y547 144 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 F11RQ9Y624 299 aaKnown RBP4.12□□□□□ -1.75
ATXN3-244ENST00000556898 TRRAPQ9Y4A5 3859 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 TENM1Q9UKZ4 2725 aa4.12□□□□□ -1.75
ATXN3-244ENST00000556898 IGLV11-55A0A075B6I3 123 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 MFSD2BA6NFX1 497 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 NPIPB5A8MRT5 1133 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 HMSDA8MTL9 139 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 DIRC3C9JPN6 131 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 INS-IGF2F8WCM5 200 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 M0QZ24 198 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 M0QZK8 103 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 MT-CO2P00403 227 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 IGHV3-11P01762 117 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 IFNA4P05014 189 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 IGF1P05019 195 aa4.11□□□□□ -1.75
ATXN3-244ENST00000556898 MDKP21741 143 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms