RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 PDE6HQ13956 83 aa0.49□□□□□ -2.33
LINC00871-203ENST00000556869 HIST3H3Q16695 136 aa0.49□□□□□ -2.33
LINC00871-203ENST00000556869 GDF5OSQ5U4N7 250 aa0.49□□□□□ -2.33
LINC00871-203ENST00000556869 TEX261Q6UWH6 196 aa0.49□□□□□ -2.33
LINC00871-203ENST00000556869 SIGLECL1Q8N7X8 197 aa0.49□□□□□ -2.33
LINC00871-203ENST00000556869 OR52E6Q96RD3 313 aa0.49□□□□□ -2.33
LINC00871-203ENST00000556869 OSTCQ9NRP0 149 aa0.49□□□□□ -2.33
LINC00871-203ENST00000556869 GUCA1BQ9UMX6 200 aa0.49□□□□□ -2.33
LINC00871-203ENST00000556869 U3KQ87 197 aa0.49□□□□□ -2.33
LINC00871-203ENST00000556869 TNRC6BQ9UPQ9 1833 aaKnown RBP0.49□□□□□ -2.33
LINC00871-203ENST00000556869 TNRC6AQ8NDV7 1962 aaKnown RBP0.48□□□□□ -2.33
LINC00871-203ENST00000556869 RIC1Q4ADV7 1423 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 DOCK5Q9H7D0 1870 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 MUC5BQ9HC84 5762 aaPredicted RBP0.48□□□□□ -2.33
LINC00871-203ENST00000556869 STRCQ7RTU9 1775 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 CCDC160A6NGH7 325 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 C19orf84I3L1E1 186 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 OR2B3O76000 313 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 PROSCO94903 275 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 IFNA5P01569 189 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 HIST1H1EP10412 219 aaKnown RBP0.48□□□□□ -2.33
LINC00871-203ENST00000556869 COX6A1P12074 109 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 MIFP14174 115 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 RPL5P46777 297 aaKnown RBP0.48□□□□□ -2.33
LINC00871-203ENST00000556869 CNBPP62633 177 aaKnown RBP0.48□□□□□ -2.33
LINC00871-203ENST00000556869 TRAPPC6BQ86SZ2 158 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 CLECL1Q8IZS7 167 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 TMEM86BQ8N661 226 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 GPR146Q96CH1 333 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 DCUN1D1Q96GG9 259 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 MIXL1Q9H2W2 232 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 CDC42SE1Q9NRR8 79 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 RASL12Q9NYN1 266 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 SLC35A3Q9Y2D2 325 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 TMEM56-RWDD3S4R434 201 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 SCN3AQ9NY46 2000 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 TOPBP1Q92547 1522 aa0.48□□□□□ -2.33
LINC00871-203ENST00000556869 MED12Q93074 2177 aa0.47□□□□□ -2.33
LINC00871-203ENST00000556869 CEP192Q8TEP8 1941 aa0.47□□□□□ -2.33
LINC00871-203ENST00000556869 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.47□□□□□ -2.33
LINC00871-203ENST00000556869 OR4C46A6NHA9 309 aa0.47□□□□□ -2.33
LINC00871-203ENST00000556869 BUB1B-PAK6H3BSN5 160 aa0.47□□□□□ -2.33
LINC00871-203ENST00000556869 ZNF25P17030 456 aaPredicted RBP0.47□□□□□ -2.33
LINC00871-203ENST00000556869 HIST1H1TP22492 207 aaPredicted RBP0.47□□□□□ -2.33
LINC00871-203ENST00000556869 SULT1A1P50225 295 aa0.47□□□□□ -2.33
LINC00871-203ENST00000556869 MAGOHP61326 146 aaKnown RBP0.47□□□□□ -2.33
LINC00871-203ENST00000556869 OR2F1Q13607 317 aa0.47□□□□□ -2.33
LINC00871-203ENST00000556869 KRT222Q8N1A0 295 aa0.47□□□□□ -2.33
LINC00871-203ENST00000556869 OR52R1Q8NGF1 315 aa0.47□□□□□ -2.33
LINC00871-203ENST00000556869 BORCS5Q969J3 196 aa0.47□□□□□ -2.33
LINC00871-203ENST00000556869 CCDC90BQ9GZT6 254 aa0.47□□□□□ -2.33
LINC00871-203ENST00000556869 C6orf62Q9GZU0 229 aaPredicted RBP0.47□□□□□ -2.33
LINC00871-203ENST00000556869 M0R036 132 aa0.46□□□□□ -2.34
LINC00871-203ENST00000556869 PIRO00625 290 aa0.46□□□□□ -2.34
LINC00871-203ENST00000556869 LYZL6O75951 148 aa0.46□□□□□ -2.34
LINC00871-203ENST00000556869 AHSA1O95433 338 aa0.46□□□□□ -2.34
LINC00871-203ENST00000556869 DNAL4O96015 105 aa0.46□□□□□ -2.34
LINC00871-203ENST00000556869 NKX2-5P52952 324 aaPredicted RBP0.46□□□□□ -2.34
LINC00871-203ENST00000556869 CDC42P60953 191 aa0.46□□□□□ -2.34
LINC00871-203ENST00000556869 RHOBP62745 196 aa0.46□□□□□ -2.34
LINC00871-203ENST00000556869 ACOT6Q3I5F7 207 aaPredicted RBP0.46□□□□□ -2.34
LINC00871-203ENST00000556869 OR13D1Q8NGV5 346 aa0.46□□□□□ -2.34
LINC00871-203ENST00000556869 PATE1Q8WXA2 126 aa0.46□□□□□ -2.34
LINC00871-203ENST00000556869 AMELYQ99218 206 aa0.46□□□□□ -2.34
LINC00871-203ENST00000556869 VPS29Q9UBQ0 182 aa0.46□□□□□ -2.34
LINC00871-203ENST00000556869 ZNF469Q96JG9 3925 aaPredicted RBP0.46□□□□□ -2.34
LINC00871-203ENST00000556869 MAP3K5Q99683 1374 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 TRAV12-1A0A0B4J245 112 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 C1orf196B1AJZ1 125 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 M0R2N4 97 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 NCR3O14931 201 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 IFNA16P05015 189 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 DEFB113Q30KQ7 82 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 C1orf137Q5JT78 98 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 SBSPONQ8IVN8 264 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 C8orf76Q96K31 380 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 OR51V1Q9H2C8 321 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 NHP2Q9NX24 153 aaKnown RBP0.45□□□□□ -2.34
LINC00871-203ENST00000556869 EPDR1Q9UM22 224 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 UTP11Q9Y3A2 253 aaKnown RBP0.45□□□□□ -2.34
LINC00871-203ENST00000556869 WRNQ14191 1432 aaPredicted RBP eCLIP0.45□□□□□ -2.34
LINC00871-203ENST00000556869 LAMA4Q16363 1823 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 MTUS2Q5JR59 1369 aa0.45□□□□□ -2.34
LINC00871-203ENST00000556869 SNAPC4Q5SXM2 1469 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 DOCK3Q8IZD9 2030 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 TRAV26-2A0A0B4J265 109 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 SMIM23A6NLE4 172 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 ZNF736B4DX44 427 aaPredicted RBP0.44□□□□□ -2.34
LINC00871-203ENST00000556869 CHP2O43745 196 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 RBP1P09455 135 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 OR4E1P0C645 316 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 SMIM10L2AP0DMW4 78 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 SMIM10L2BP0DMW5 78 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 CASP1P29466 404 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 YPEL3P61236 119 aaPredicted RBP0.44□□□□□ -2.34
LINC00871-203ENST00000556869 MPV17LQ2QL34 196 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 BRMS1LQ5PSV4 323 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 FAM74A1Q5RGS3 127 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 Q8N6K4 173 aa0.44□□□□□ -2.34
LINC00871-203ENST00000556869 C3orf56Q8N813 242 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms