RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 RAB5CP51148 216 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 EDDM3BP56851 147 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 RPL31P62899 125 aaKnown RBP4.04□□□□□ -1.76
SRP54-211ENST00000556445 MEF2CQ06413 473 aaPredicted RBP4.04□□□□□ -1.76
SRP54-211ENST00000556445 PRR30Q53SZ7 412 aaPredicted RBP4.04□□□□□ -1.76
SRP54-211ENST00000556445 NMSQ5H8A3 153 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 DUX4L9Q6RFH8 374 aaPredicted RBP4.04□□□□□ -1.76
SRP54-211ENST00000556445 FAM19A1Q7Z5A9 133 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 HSD17B13Q7Z5P4 300 aaPredicted RBP4.04□□□□□ -1.76
SRP54-211ENST00000556445 COMMD7Q86VX2 200 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 ZNF843Q8N446 348 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 EIF4E3Q8N5X7 224 aaKnown RBP4.04□□□□□ -1.76
SRP54-211ENST00000556445 DRAM1Q8N682 238 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 CD177Q8N6Q3 437 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 UBAC2Q8NBM4 344 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 OR8U1Q8NH10 309 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 OR51H1Q8NH63 302 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 OR1L1Q8NH94 360 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 MRGPRDQ8TDS7 321 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 ADTRPQ96IZ2 230 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 C2orf48Q96LS8 159 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 OR2D2Q9H210 308 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 PRORYQ9H606 182 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 PLEKHA3Q9HB20 300 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 OR5AC2Q9NZP5 309 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 OR1A1Q9P1Q5 309 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 RALYQ9UKM9 306 aaKnown RBP4.04□□□□□ -1.76
SRP54-211ENST00000556445 LINC00312Q9Y6C7 94 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 CACNA1DQ01668 2161 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 PRR14LQ5THK1 2151 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 CADP27708 2225 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 DYSFO75923 2080 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 NKX2-6A6NCS4 301 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 SHISA9B4DS77 424 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 C15orf65H3BRN8 121 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 TGOLN2O43493 480 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 PITX3O75364 302 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 CLDN1O95832 211 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 HPRT1P00492 218 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 IGKV3-20P01619 116 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 CGB3P0DN86 165 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 CGB7P0DN87 165 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 LPAR6P43657 344 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 PPOXP50336 477 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 CAV2P51636 162 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 HNRNPA3P51991 378 aaKnown RBP4.03□□□□□ -1.76
SRP54-211ENST00000556445 TMEM33P57088 247 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 ERVK-16P61578 105 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 HBG1P69891 147 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 HBG2P69892 147 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 CCL8P80075 99 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 TLE4Q04727 773 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 RAB31Q13636 194 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 EDDM3AQ14507 147 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 MORN2Q502X0 79 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 LRRC10Q5BKY1 277 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 PDZD11Q5EBL8 140 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 MRPL52Q86TS9 123 aaKnown RBP4.03□□□□□ -1.76
SRP54-211ENST00000556445 VKORC1L1Q8N0U8 176 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 OR13A1Q8NGR1 328 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 LHFPL5Q8TAF8 219 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 ZNF502Q8TBZ5 544 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 TCTEX1D2Q8WW35 142 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 CYYR1Q96J86 154 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 NOL4LQ96MY1 436 aaPredicted RBP4.03□□□□□ -1.76
SRP54-211ENST00000556445 CIB3Q96Q77 187 aaPredicted RBP4.03□□□□□ -1.76
SRP54-211ENST00000556445 TBX15Q96SF7 602 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 AGMATQ9BSE5 352 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 PPDPFQ9H3Y8 114 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 LINC00574Q9H8X3 128 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 LYRM2Q9NU23 88 aaPredicted RBP4.03□□□□□ -1.76
SRP54-211ENST00000556445 CALYQ9NYX4 217 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 IDI2-AS1Q9NZ38 188 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 KAAG1Q9UBP8 84 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 WSB1Q9Y6I7 421 aa4.03□□□□□ -1.76
SRP54-211ENST00000556445 POLEQ07864 2286 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 MAP1BP46821 2468 aaKnown RBP4.02□□□□□ -1.77
SRP54-211ENST00000556445 TANC2Q9HCD6 1990 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 SPTBN2O15020 2390 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.02□□□□□ -1.77
SRP54-211ENST00000556445 TRAV39A0A0B4J263 110 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 IGHV1-69-2A0A0G2JMI3 117 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 KIR2DL5BA0A0G2JN68 375 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 KIR2DL5BA0A0G2JPC4 375 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 MSGN1A6NI15 193 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 UMAD1C9J7I0 102 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 E7EQL1 145 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 F5H768 121 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 I3L521 148 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 TNFSF12O43508 249 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 NDUFB3O43676 98 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 SYNGR2O43760 224 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 CYB5R3P00387 301 aaPredicted RBP4.02□□□□□ -1.77
SRP54-211ENST00000556445 GPR183P32249 361 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 PPP1CCP36873 323 aaKnown RBP4.02□□□□□ -1.77
SRP54-211ENST00000556445 SULT1A2P50226 295 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 POU2AF1Q16633 256 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 IL34Q6ZMJ4 242 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 ZNF329Q86UD4 541 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 KIR2DL5AQ8N109 375 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms