RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SLC25A33Q9BSK2 321 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 AREGP15514 252 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 GCSHP23434 173 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 BMI1P35226 326 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 RAB1BQ9H0U4 201 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 FOXA2Q9Y261 457 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 LY96Q9Y6Y9 160 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 PI4KAP42356 2102 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 A0A1B0GUT8 65 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 CIDEAO60543 219 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 TYMSP04818 313 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 OR4A5Q8NH83 315 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 F11RQ9Y624 299 aaKnown RBP12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 OR10W1Q8NGF6 305 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 J3KRW8 73 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 GOSR1O95249 250 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 TMEM105Q8N8V8 129 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 Q9H3A6 140 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 EPDR1Q9UM22 224 aa12.42□□□□□ -0.42
ARHGEF40-207ENST00000556399 GPX1P07203 203 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 PLP1P60201 277 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 SCGB1D4Q6XE38 83 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 TMEM136Q6ZRR5 245 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 PRDM6Q9NQX0 595 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 SRRM5B3KS81 715 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 C3orf79P0CE67 100 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 SELLP14151 372 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 CX3CL1P78423 397 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 LPAR2Q9HBW0 351 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 LINC00312Q9Y6C7 94 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 DENND4AQ7Z401 1863 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 IGHV1-18A0A0C4DH31 117 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 NIT1Q86X76 327 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 NUDT10Q8NFP7 164 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 NUDT11Q96G61 164 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 CCL3L1P16619 93 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 FBLN7Q53RD9 439 aa12.41□□□□□ -0.42
ARHGEF40-207ENST00000556399 MYOD1P15172 320 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 Q1RN00 199 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 TSKUQ8WUA8 353 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 TCRBV4S1A1TA0A5B7 111 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 IL4P05112 153 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 LINC00614P0C842 121 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 CDKN1AP38936 164 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 LCN12Q6JVE5 192 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 MAP1LC3AQ9H492 121 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 ZNF407Q9C0G0 2248 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 KIF26AQ9ULI4 1882 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 F5H697 171 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 ZNF883P0CG24 379 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 FAM27E3Q08E93 113 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 SPANXN1Q5VSR9 72 aa12.4□□□□□ -0.42
ARHGEF40-207ENST00000556399 MLNRO43193 412 aa12.4□□□□□ -0.43
ARHGEF40-207ENST00000556399 MRPL52Q86TS9 123 aaKnown RBP12.4□□□□□ -0.43
ARHGEF40-207ENST00000556399 NCOR1O75376 2440 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 A1L4Q6 167 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 FAM53AQ6NSI3 398 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 C1RLQ9NZP8 487 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 FTH1P19P0C7X4 201 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 LOXL4Q96JB6 756 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 ZNF503-AS2A6NEH8 195 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 FAM181BA6NEQ2 426 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 PRR31Q5SQ13 230 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 C20orf144Q9BQM9 153 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 ZNF257Q9Y2Q1 563 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 ECSCRQ19T08 205 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 ZNF414Q96IQ9 312 aa12.39□□□□□ -0.43
ARHGEF40-207ENST00000556399 UNQ5815/PRO19632Q6UWF5 114 aa12.38□□□□□ -0.43
ARHGEF40-207ENST00000556399 ZNF841Q6ZN19 808 aa12.38□□□□□ -0.43
ARHGEF40-207ENST00000556399 SH2D7A6NKC9 451 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF40-207ENST00000556399 CD40P25942 277 aa12.38□□□□□ -0.43
ARHGEF40-207ENST00000556399 MFAP4P55083 255 aa12.38□□□□□ -0.43
ARHGEF40-207ENST00000556399 MEF2CQ06413 473 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF40-207ENST00000556399 C2orf83Q53S99 150 aa12.38□□□□□ -0.43
ARHGEF40-207ENST00000556399 ZNF114Q8NC26 417 aa12.38□□□□□ -0.43
ARHGEF40-207ENST00000556399 PRELID3AQ96N28 172 aa12.38□□□□□ -0.43
ARHGEF40-207ENST00000556399 RPS20P60866 119 aaKnown RBP12.38□□□□□ -0.43
ARHGEF40-207ENST00000556399 CLEC7AQ9BXN2 247 aa12.38□□□□□ -0.43
ARHGEF40-207ENST00000556399 SP9P0CG40 484 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 RELQ04864 619 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 SRSF9Q13242 221 aaKnown RBP eCLIP12.37□□□□□ -0.432e-6■□□□□ 8.7
ARHGEF40-207ENST00000556399 FBXL15Q9H469 300 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 PSG9Q00887 426 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 Q0VG73 95 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 ZNF788Q6ZQV5 615 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 TEX45Q8NA69 505 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 RNF138Q8WVD3 245 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 PPIAL4CA0A0B4J2A2 164 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 PPIAL4GP0DN37 164 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 MBNL2Q5VZF2 373 aaKnown RBP12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 MUC21A0A0G2JKD1 596 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 MUC21A0A140T8X8 626 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 MUC21Q5SSG8 566 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 LYRM7Q5U5X0 104 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 Q6ZSR3 168 aa12.37□□□□□ -0.43
ARHGEF40-207ENST00000556399 TRAV30A0A087WSZ9 112 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 CCDC144NLQ6NUI1 221 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 Q6ZWC4 215 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 ATP5L2Q7Z4Y8 100 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms