RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 PRTFDC1Q9NRG1 225 aa1.62□□□□□ -2.15
CDKN3-210ENST00000556305 VPS29Q9UBQ0 182 aa1.62□□□□□ -2.15
CDKN3-210ENST00000556305 ABCA8O94911 1581 aa1.62□□□□□ -2.15
CDKN3-210ENST00000556305 GPR98Q8WXG9 6306 aa1.62□□□□□ -2.15
CDKN3-210ENST00000556305 TARBP1Q13395 1621 aaKnown RBP1.62□□□□□ -2.15
CDKN3-210ENST00000556305 USP32Q8NFA0 1604 aa1.62□□□□□ -2.15
CDKN3-210ENST00000556305 TLN2Q9Y4G6 2542 aa1.62□□□□□ -2.15
CDKN3-210ENST00000556305 EP300Q09472 2414 aaPredicted RBP1.61□□□□□ -2.15
CDKN3-210ENST00000556305 DISP1Q96F81 1524 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 FLT4P35916 1363 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 CELSR2Q9HCU4 2923 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 RGPD1P0DJD0 1748 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 CEP170BQ9Y4F5 1589 aaPredicted RBP1.61□□□□□ -2.15
CDKN3-210ENST00000556305 TRAPPC8Q9Y2L5 1435 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 A0A0D9SEW6 157 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 IGKV2-29A2NJV5 120 aaPredicted RBP1.61□□□□□ -2.15
CDKN3-210ENST00000556305 MEIS3P1A6NDR6 274 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 INMT-MINDY4F8WBC2 141 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 ORC5O43913 435 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 IGHV3-7P01780 117 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 METTL15P1P0C7V9 234 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 TRGC1P0CF51 173 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 HLA-DMBP28068 263 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 FXYD2P54710 66 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 CCL20P78556 96 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 GUK1Q16774 197 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 Q6ZS49 121 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 TRAPPC5Q8IUR0 188 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 PPP1R14BQ96C90 147 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 WDR61Q9GZS3 305 aaKnown RBP1.61□□□□□ -2.15
CDKN3-210ENST00000556305 A2MP01023 1474 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 CAMSAP2Q08AD1 1489 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 MAGI3Q5TCQ9 1506 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 KDM5DQ9BY66 1539 aa1.61□□□□□ -2.15
CDKN3-210ENST00000556305 COL12A1Q99715 3063 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 ABCA3Q99758 1704 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 MDC1Q14676 2089 aaKnown RBP1.6□□□□□ -2.15
CDKN3-210ENST00000556305 KMT2CQ8NEZ4 4911 aaKnown RBP1.6□□□□□ -2.15
CDKN3-210ENST00000556305 PREX2Q70Z35 1606 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 A0A0J9YY10 115 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 TRBV10-2A0A0K0K1G8 114 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 A0A1B0GX78 115 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 OR51F1A6NGY5 319 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 ZNF737O75373 536 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 EVX1P49640 407 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 ELOBQ15370 118 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 LPCAT3Q6P1A2 487 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 RPL22L1Q6P5R6 122 aaKnown RBP1.6□□□□□ -2.15
CDKN3-210ENST00000556305 MRPL30Q8TCC3 161 aaKnown RBP1.6□□□□□ -2.15
CDKN3-210ENST00000556305 SPACA4Q8TDM5 124 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 ULBP3Q9BZM4 244 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 UBAP1Q9NZ09 502 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 FANCAO15360 1455 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 FRYLO94915 3013 aa1.6□□□□□ -2.15
CDKN3-210ENST00000556305 GLI3P10071 1580 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 C10orf71Q711Q0 1435 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 YTHDC2Q9H6S0 1430 aaKnown RBP1.59□□□□□ -2.15
CDKN3-210ENST00000556305 CROCC2H7BZ55 1655 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 TGIF2-C20orf24A0A0A6YYL0 155 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 SDCBPO00560 298 aaPredicted RBP1.59□□□□□ -2.15
CDKN3-210ENST00000556305 E2F6O75461 281 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 HLA-DRB1P01911 266 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 CRPP02741 224 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 SERPINA6P08185 405 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 STX5Q13190 355 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 SPOPLQ6IQ16 392 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 Q6ZRN7 208 aaPredicted RBP1.59□□□□□ -2.15
CDKN3-210ENST00000556305 OR5B17Q8NGF7 314 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 OR8J2Q8NGG1 315 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 MBD3L1Q8WWY6 194 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 C11orf40Q8WZ69 217 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 PTPRSQ13332 1948 aa1.59□□□□□ -2.15
CDKN3-210ENST00000556305 DOCK10Q96BY6 2186 aa1.59□□□□□ -2.16
CDKN3-210ENST00000556305 WDFY3Q8IZQ1 3526 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 C3P01024 1663 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 TGP01266 2768 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 ZMYM4Q5VZL5 1548 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 ZNF705BP0CI00 300 aaPredicted RBP1.58□□□□□ -2.16
CDKN3-210ENST00000556305 DEFA4P12838 97 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 RPS4Y1P22090 263 aaKnown RBP1.58□□□□□ -2.16
CDKN3-210ENST00000556305 HIST1H2BOP23527 126 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 HIST1H2BBP33778 126 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 EIF2B2P49770 351 aaKnown RBP1.58□□□□□ -2.16
CDKN3-210ENST00000556305 AQP4P55087 323 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 HIST1H2BDP58876 126 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 HIST1H2BCP62807 126 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 HBA1P69905 142 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 HIST2H2BEQ16778 126 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 ACOT6Q3I5F7 207 aaPredicted RBP1.58□□□□□ -2.16
CDKN3-210ENST00000556305 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.58□□□□□ -2.16
CDKN3-210ENST00000556305 C7orf65Q6ZTY9 151 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 TMEM86BQ8N661 226 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 OR8B3Q8NGG8 313 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 HIST1H2BHQ93079 126 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 TMEM106AQ96A25 262 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 HIST1H2BNQ99877 126 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 HIST1H2BMQ99879 126 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 HSPB9Q9BQS6 159 aa1.58□□□□□ -2.16
CDKN3-210ENST00000556305 MRPL32Q9BYC8 188 aaKnown RBP1.58□□□□□ -2.16
CDKN3-210ENST00000556305 OR8D2Q9GZM6 311 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 1847.7 ms