RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 KIR2DL5BA0A0G2JPC4 375 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 PPIAL4DF5H284 164 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 PRRG2O14669 202 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 HLA-DQA1P01909 254 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 AMY1AP04745 511 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 SNRPCP09234 159 aaKnown RBP5.68□□□□□ -1.5
TDP1-213ENST00000555880 PPIAL4FP0DN26 164 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 GRNP28799 593 aaKnown RBP5.68□□□□□ -1.5
TDP1-213ENST00000555880 BRS3P32247 399 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 REG1BP48304 166 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 TMEM183BQ1AE95 376 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 VMA21Q3ZAQ7 101 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 TMEM200BQ69YZ2 307 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 KIR2DL5AQ8N109 375 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 RBMXL3Q8N7X1 1067 aaKnown RBP5.68□□□□□ -1.5
TDP1-213ENST00000555880 C8orf31Q8N9H6 132 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 TMEM167AQ8TBQ9 72 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 C22orf15Q8WYQ4 148 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 TMEM186Q96B77 213 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 ZNF503Q96F45 646 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 MISP3Q96FF7 219 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 HSPB9Q9BQS6 159 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 RNASE7Q9H1E1 156 aaKnown RBP5.68□□□□□ -1.5
TDP1-213ENST00000555880 ZNF586Q9NXT0 402 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 ZNRD1Q9P1U0 126 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 CDC42EP3Q9UKI2 254 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 POLR3KQ9Y2Y1 108 aaPredicted RBP5.68□□□□□ -1.5
TDP1-213ENST00000555880 WASHC3Q9Y3C0 194 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 PPIAL4AQ9Y536 164 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 LOC400499M0QZD8 3231 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 M0R143 59 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 NUPR1O60356 82 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 CCL3L1P16619 93 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 MC5RP33032 325 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 TCL1AP56279 114 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 BSPH1Q075Z2 132 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 FXYD3Q14802 87 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 ADIPOQQ15848 244 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 OR10J3Q5JRS4 329 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 ETFRF1Q6IPR1 90 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 TGIF2LXQ8IUE1 241 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 OR2T6Q8NHC8 308 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 IGF2BP2-AS1Q96M15 143 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 CHRDL1Q9BU40 450 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 PAXXQ9BUH6 204 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 SLC25A2Q9BXI2 301 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 ZNF331Q9NQX6 463 aaPredicted RBP5.67□□□□□ -1.5
TDP1-213ENST00000555880 DCAF16Q9NXF7 216 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 AMMECR1Q9Y4X0 333 aaPredicted RBP5.67□□□□□ -1.5
TDP1-213ENST00000555880 NAV3Q8IVL0 2385 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 ANKRD11Q6UB99 2663 aaPredicted RBP5.67□□□□□ -1.5
TDP1-213ENST00000555880 ZNF292O60281 2723 aa5.67□□□□□ -1.5
TDP1-213ENST00000555880 SMIM27A0A1W2PRY6 76 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 TCRBV4S1A1TA0A5B7 111 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 TMEM178BH3BS89 294 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 SPINK4O60575 86 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 MLANAQ16655 118 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 Q6ZWC4 215 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 LINC00311Q8N616 119 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 ST6GALNAC3Q8NDV1 305 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 STXBP6Q8NFX7 210 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 CCL17Q92583 94 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 FAM167A-AS1Q96KT0 104 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 VAMP8Q9BV40 100 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 GNB4Q9HAV0 340 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 NGBQ9NPG2 151 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 ZNF355PQ9NSJ1 428 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 A0A0G2JNJ9 132 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 IZUMO1RA6ND01 250 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 M0QZK8 103 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 PEX7O00628 323 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 APCSP02743 223 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 RNF224P0DH78 156 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 LGALS7P47929 136 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 UBE2G1P62253 170 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 SLC35B1P78383 322 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 WT1-ASQ06250 92 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 MRPL54Q6P161 138 aaKnown RBP5.66□□□□□ -1.5
TDP1-213ENST00000555880 RASL11AQ6T310 242 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 TEX43Q6ZNM6 134 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 TMEM136Q6ZRR5 245 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 C22orf34Q6ZV56 151 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 MRPL52Q86TS9 123 aaKnown RBP5.66□□□□□ -1.5
TDP1-213ENST00000555880 NPIPB3Q92617 1050 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 PERPQ96FX8 193 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 KCNS1Q96KK3 526 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 C20orf144Q9BQM9 153 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 DYNLRB1Q9NP97 96 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 CBLN4Q9NTU7 201 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 Q9UFV3 132 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 TP53TG3Q9ULZ0 132 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 ROS1P08922 2347 aa5.66□□□□□ -1.5
TDP1-213ENST00000555880 ZFHX2Q9C0A1 2572 aaPredicted RBP5.65□□□□□ -1.5
TDP1-213ENST00000555880 TRAV5A0A0B4J249 113 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 PSMB11A5LHX3 300 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 DPRXA6NFQ7 191 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 EREGO14944 169 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 ENSAO43768 121 aaKnown RBP5.65□□□□□ -1.5
TDP1-213ENST00000555880 SLC25A17O43808 307 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 ZNF253O75346 499 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms