RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 CTSGP08311 255 aa17.38■□□□□ 0.37
CDKN3-208ENST00000555837 NPY1RP25929 384 aa17.38■□□□□ 0.37
CDKN3-208ENST00000555837 ANKRD55Q3KP44 614 aa17.38■□□□□ 0.37
CDKN3-208ENST00000555837 B9D2Q9BPU9 175 aa17.38■□□□□ 0.37
CDKN3-208ENST00000555837 ZC4H2Q9NQZ6 224 aa17.38■□□□□ 0.37
CDKN3-208ENST00000555837 PRR13Q9NZ81 148 aa17.38■□□□□ 0.37
CDKN3-208ENST00000555837 LSM4Q9Y4Z0 139 aaKnown RBP17.38■□□□□ 0.37
CDKN3-208ENST00000555837 TRAV25A0A0B4J276 109 aa17.37■□□□□ 0.37
CDKN3-208ENST00000555837 FAM240BA0A1B0GVZ2 78 aa17.37■□□□□ 0.37
CDKN3-208ENST00000555837 RAB11AP62491 216 aa17.37■□□□□ 0.37
CDKN3-208ENST00000555837 DHRS2Q13268 280 aa17.37■□□□□ 0.37
CDKN3-208ENST00000555837 DEFB114Q30KQ6 69 aa17.37■□□□□ 0.37
CDKN3-208ENST00000555837 LAMTOR1Q6IAA8 161 aa17.37■□□□□ 0.37
CDKN3-208ENST00000555837 C20orf85Q9H1P6 137 aa17.37■□□□□ 0.37
CDKN3-208ENST00000555837 TMEM213A2RRL7 107 aa17.36■□□□□ 0.37
CDKN3-208ENST00000555837 PLA2G10O15496 165 aa17.36■□□□□ 0.37
CDKN3-208ENST00000555837 YIF1AO95070 293 aa17.36■□□□□ 0.37
CDKN3-208ENST00000555837 TCRBP04435 133 aa17.36■□□□□ 0.37
CDKN3-208ENST00000555837 CD5P06127 495 aa17.36■□□□□ 0.37
CDKN3-208ENST00000555837 HOXB5P09067 269 aa17.36■□□□□ 0.37
CDKN3-208ENST00000555837 NHLRC4P0CG21 123 aaPredicted RBP17.36■□□□□ 0.37
CDKN3-208ENST00000555837 RBPMS2Q6ZRY4 209 aaKnown RBP17.36■□□□□ 0.37
CDKN3-208ENST00000555837 UXS1Q8NBZ7 420 aa17.36■□□□□ 0.37
CDKN3-208ENST00000555837 OR4X1Q8NH49 305 aa17.36■□□□□ 0.37
CDKN3-208ENST00000555837 C20orf24Q9BUV8 137 aa17.36■□□□□ 0.37
CDKN3-208ENST00000555837 PITX3O75364 302 aa17.35■□□□□ 0.37
CDKN3-208ENST00000555837 CLN5O75503 358 aa17.35■□□□□ 0.37
CDKN3-208ENST00000555837 C8orf88P0DMB2 117 aa17.35■□□□□ 0.37
CDKN3-208ENST00000555837 BTCP35070 178 aa17.35■□□□□ 0.37
CDKN3-208ENST00000555837 ZNF600Q6ZNG1 722 aa17.35■□□□□ 0.37
CDKN3-208ENST00000555837 CHRDL1Q9BU40 450 aa17.35■□□□□ 0.37
CDKN3-208ENST00000555837 RBKSQ9H477 322 aa17.35■□□□□ 0.37
CDKN3-208ENST00000555837 IGHV3-35A0A0C4DH35 117 aa17.34■□□□□ 0.37
CDKN3-208ENST00000555837 F8W735 103 aaPredicted RBP17.34■□□□□ 0.37
CDKN3-208ENST00000555837 CD300EQ496F6 205 aaPredicted RBP17.34■□□□□ 0.37
CDKN3-208ENST00000555837 GGNBP1Q5YKI7 109 aa17.34■□□□□ 0.37
CDKN3-208ENST00000555837 FLVCR2Q9UPI3 526 aa17.34■□□□□ 0.37
CDKN3-208ENST00000555837 WRBO00258 174 aa17.33■□□□□ 0.36
CDKN3-208ENST00000555837 TMEM50AO95807 157 aa17.33■□□□□ 0.36
CDKN3-208ENST00000555837 IFNA4P05014 189 aa17.33■□□□□ 0.36
CDKN3-208ENST00000555837 ANXA7P20073 488 aaKnown RBP17.33■□□□□ 0.36
CDKN3-208ENST00000555837 ADMP35318 185 aa17.33■□□□□ 0.36
CDKN3-208ENST00000555837 DEFA1P59665 94 aa17.33■□□□□ 0.36
CDKN3-208ENST00000555837 DEFA3P59666 94 aa17.33■□□□□ 0.36
CDKN3-208ENST00000555837 ASAH1Q13510 395 aa17.33■□□□□ 0.36
CDKN3-208ENST00000555837 TM4SF20Q53R12 229 aa17.33■□□□□ 0.36
CDKN3-208ENST00000555837 UNQ9165/PRO28630Q6UXU0 137 aa17.33■□□□□ 0.36
CDKN3-208ENST00000555837 SLC16A13Q7RTY0 426 aa17.33■□□□□ 0.36
CDKN3-208ENST00000555837 MITD1Q8WV92 249 aa17.33■□□□□ 0.36
CDKN3-208ENST00000555837 NARS2Q96I59 477 aaKnown RBP17.33■□□□□ 0.36
CDKN3-208ENST00000555837 UPK1BO75841 260 aa17.32■□□□□ 0.36
CDKN3-208ENST00000555837 NXPH3O95157 252 aa17.32■□□□□ 0.36
CDKN3-208ENST00000555837 GUCA2BQ16661 112 aa17.32■□□□□ 0.36
CDKN3-208ENST00000555837 HAPLN4Q86UW8 402 aa17.32■□□□□ 0.36
CDKN3-208ENST00000555837 ENKURQ8TC29 256 aa17.32■□□□□ 0.36
CDKN3-208ENST00000555837 TMEM231Q9H6L2 316 aa17.32■□□□□ 0.36
CDKN3-208ENST00000555837 NUDT15Q9NV35 164 aa17.32■□□□□ 0.36
CDKN3-208ENST00000555837 TRAV14DV4A0A0A6YYC5 116 aa17.31■□□□□ 0.36
CDKN3-208ENST00000555837 SYNGR2O43760 224 aa17.31■□□□□ 0.36
CDKN3-208ENST00000555837 FABP1P07148 127 aa17.31■□□□□ 0.36
CDKN3-208ENST00000555837 H2AFB2P0C5Z0 115 aa17.31■□□□□ 0.36
CDKN3-208ENST00000555837 GPX4P36969 197 aaPredicted RBP17.31■□□□□ 0.36
CDKN3-208ENST00000555837 TMEM116Q8NCL8 245 aa17.31■□□□□ 0.36
CDKN3-208ENST00000555837 OR1S2Q8NGQ3 325 aa17.31■□□□□ 0.36
CDKN3-208ENST00000555837 CACNG8Q8WXS5 425 aa17.31■□□□□ 0.36
CDKN3-208ENST00000555837 OR10C1Q96KK4 312 aa17.31■□□□□ 0.36
CDKN3-208ENST00000555837 A8MZ25 164 aa17.3■□□□□ 0.36
CDKN3-208ENST00000555837 IGHV3-48P01763 117 aa17.3■□□□□ 0.36
CDKN3-208ENST00000555837 TRAV6A0A075B6T7 132 aa17.29■□□□□ 0.36
CDKN3-208ENST00000555837 A0A1W2PS18 150 aa17.29■□□□□ 0.36
CDKN3-208ENST00000555837 NKX2-1P43699 371 aaPredicted RBP17.29■□□□□ 0.36
CDKN3-208ENST00000555837 BTNL8Q6UX41 500 aa17.29■□□□□ 0.36
CDKN3-208ENST00000555837 ADAMTSL5Q6ZMM2 481 aa17.29■□□□□ 0.36
CDKN3-208ENST00000555837 Q8WTZ3 238 aa17.29■□□□□ 0.36
CDKN3-208ENST00000555837 SLC35E1Q96K37 410 aa17.29■□□□□ 0.36
CDKN3-208ENST00000555837 SPAG8Q99932 426 aaPredicted RBP17.29■□□□□ 0.36
CDKN3-208ENST00000555837 FNDC4Q9H6D8 234 aaPredicted RBP17.29■□□□□ 0.36
CDKN3-208ENST00000555837 TUBA4BQ9H853 241 aa17.29■□□□□ 0.36
CDKN3-208ENST00000555837 PFDN2Q9UHV9 154 aa17.29■□□□□ 0.36
CDKN3-208ENST00000555837 GPN1Q9HCN4 374 aaPredicted RBP17.28■□□□□ 0.36
CDKN3-208ENST00000555837 MLXQ9UH92 298 aa17.28■□□□□ 0.36
CDKN3-208ENST00000555837 DNAH3Q8TD57 4116 aa17.28■□□□□ 0.36
CDKN3-208ENST00000555837 IGHV7-4-1A0A0J9YVY3 117 aa17.27■□□□□ 0.36
CDKN3-208ENST00000555837 RND2P52198 227 aa17.27■□□□□ 0.36
CDKN3-208ENST00000555837 CMC4P56277 68 aaPredicted RBP17.27■□□□□ 0.36
CDKN3-208ENST00000555837 CD81P60033 236 aa17.27■□□□□ 0.36
CDKN3-208ENST00000555837 YPEL3P61236 119 aaPredicted RBP17.27■□□□□ 0.36
CDKN3-208ENST00000555837 PAFAH1B2P68402 229 aa17.27■□□□□ 0.36
CDKN3-208ENST00000555837 PRSS54Q6PEW0 395 aa17.27■□□□□ 0.36
CDKN3-208ENST00000555837 OR52B4Q8NGK2 314 aa17.27■□□□□ 0.36
CDKN3-208ENST00000555837 ZNF431Q8TF32 576 aaPredicted RBP17.27■□□□□ 0.36
CDKN3-208ENST00000555837 METTL26Q96S19 204 aa17.27■□□□□ 0.36
CDKN3-208ENST00000555837 NEURL2Q9BR09 285 aa17.27■□□□□ 0.36
CDKN3-208ENST00000555837 SMPXQ9UHP9 88 aa17.27■□□□□ 0.36
CDKN3-208ENST00000555837 PUS1Q9Y606 427 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDKN3-208ENST00000555837 ADAP1O75689 374 aa17.26■□□□□ 0.35
CDKN3-208ENST00000555837 NPPCP23582 126 aa17.26■□□□□ 0.35
CDKN3-208ENST00000555837 OR10J1P30954 320 aa17.26■□□□□ 0.35
CDKN3-208ENST00000555837 ID3Q02535 119 aa17.26■□□□□ 0.35
CDKN3-208ENST00000555837 IAH1Q2TAA2 248 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms