RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 ATG12O94817 140 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 RAB3DO95716 219 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 TMEM50AO95807 157 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 APOHP02749 345 aaPredicted RBP7.94□□□□□ -1.14
TDP1-212ENST00000555565 UCP1P25874 307 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 ETV6P41212 452 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 TAS2R19P59542 299 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 TRIM16LQ309B1 348 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 SCGB2B2Q4G0G5 96 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 STEAP1BQ6NZ63 245 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 Q6ZRM9 215 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 TCF24Q7RTU0 167 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 CCDC71LQ8N9Z2 235 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 DUSP18Q8NEJ0 188 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 ZFAND1Q8TCF1 268 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 MARCH1Q8TCQ1 289 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 C15orf40Q8WUR7 153 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 ST8SIA2Q92186 375 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 GINS3Q9BRX5 216 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 FNDC4Q9H6D8 234 aaPredicted RBP7.94□□□□□ -1.14
TDP1-212ENST00000555565 VSIRQ9H7M9 311 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 ZFAND3Q9H8U3 227 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 MRPL36Q9P0J6 103 aaKnown RBP7.94□□□□□ -1.14
TDP1-212ENST00000555565 COPZ2Q9P299 210 aa7.94□□□□□ -1.14
TDP1-212ENST00000555565 PUS1Q9Y606 427 aaKnown RBP eCLIP7.94□□□□□ -1.14
TDP1-212ENST00000555565 A0A1B0GU03 582 aa7.93□□□□□ -1.14
TDP1-212ENST00000555565 GABARAPH6UMI1 98 aa7.93□□□□□ -1.14
TDP1-212ENST00000555565 CTDSP2O14595 271 aa7.93□□□□□ -1.14
TDP1-212ENST00000555565 HOXA1P49639 335 aaPredicted RBP7.93□□□□□ -1.14
TDP1-212ENST00000555565 CMC4P56277 68 aaPredicted RBP7.93□□□□□ -1.14
TDP1-212ENST00000555565 MLANAQ16655 118 aa7.93□□□□□ -1.14
TDP1-212ENST00000555565 BSXQ3C1V8 233 aa7.93□□□□□ -1.14
TDP1-212ENST00000555565 FAAP20Q6NZ36 180 aa7.93□□□□□ -1.14
TDP1-212ENST00000555565 ZNF600Q6ZNG1 722 aa7.93□□□□□ -1.14
TDP1-212ENST00000555565 RRNAD1Q96FB5 475 aaKnown RBP7.93□□□□□ -1.14
TDP1-212ENST00000555565 PDCD10Q9BUL8 212 aa7.93□□□□□ -1.14
TDP1-212ENST00000555565 C6orf62Q9GZU0 229 aaPredicted RBP7.93□□□□□ -1.14
TDP1-212ENST00000555565 TMEM222Q9H0R3 208 aa7.93□□□□□ -1.14
TDP1-212ENST00000555565 CSTL1Q9H114 145 aa7.93□□□□□ -1.14
TDP1-212ENST00000555565 IGHV3-66A0A0C4DH42 116 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 CORTO00230 105 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 RGS5O15539 181 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 B3GALNT1O75752 331 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 DFFBO76075 338 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 CDS2O95674 445 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 CD5P06127 495 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 OR5AC1P0C628 307 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 RPL5P46777 297 aaKnown RBP7.92□□□□□ -1.14
TDP1-212ENST00000555565 ALDH3B2P48448 385 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 SUB1P53999 127 aaKnown RBP eCLIP7.92□□□□□ -1.14
TDP1-212ENST00000555565 PAFAH1B2P68402 229 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 SPCS2Q15005 226 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 AARDQ4LEZ3 155 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 LHFPL5Q8TAF8 219 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 GLYATL2Q8WU03 294 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 PHLDA1Q8WV24 401 aaPredicted RBP7.92□□□□□ -1.14
TDP1-212ENST00000555565 RTBDNQ9BSG5 229 aaPredicted RBP7.92□□□□□ -1.14
TDP1-212ENST00000555565 MS4A6AQ9H2W1 248 aa7.92□□□□□ -1.14
TDP1-212ENST00000555565 HERC1Q15751 4861 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 TEX13DA0A0J9YY54 714 aaPredicted RBP7.91□□□□□ -1.14
TDP1-212ENST00000555565 MPTX1A8MV57 137 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 CLN5O75503 358 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 IGKV1-17P01599 117 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 OPRK1P41145 380 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 MRPS10P82664 201 aaKnown RBP7.91□□□□□ -1.14
TDP1-212ENST00000555565 SSBP1Q04837 148 aaKnown RBP7.91□□□□□ -1.14
TDP1-212ENST00000555565 MEF2DQ14814 521 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 GPR141Q7Z602 305 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 FAM219AQ8IW50 185 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 FAM24BQ8N5W8 94 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 OR4X1Q8NH49 305 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 RNASE11Q8TAA1 199 aaKnown RBP7.91□□□□□ -1.14
TDP1-212ENST00000555565 SMIM4Q8WVI0 70 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 MRPS26Q9BYN8 205 aaKnown RBP7.91□□□□□ -1.14
TDP1-212ENST00000555565 ENY2Q9NPA8 101 aa7.91□□□□□ -1.14
TDP1-212ENST00000555565 TRAV2A0A0B4J234 112 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 DNASE2O00115 360 aaPredicted RBP7.9□□□□□ -1.14
TDP1-212ENST00000555565 NPPCP23582 126 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 CRYBB3P26998 211 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 DEFB131AP59861 70 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 SPCS3P61009 180 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 RPL11P62913 178 aaKnown RBP7.9□□□□□ -1.14
TDP1-212ENST00000555565 SURF2Q15527 256 aaPredicted RBP7.9□□□□□ -1.14
TDP1-212ENST00000555565 LEMD1Q68G75 181 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 SELENOHQ8IZQ5 122 aaKnown RBP7.9□□□□□ -1.14
TDP1-212ENST00000555565 TMEM217Q8N7C4 229 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 OR4C16Q8NGL9 310 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 OR52E5Q8NH55 327 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 RBPMSQ93062 196 aaKnown RBP7.9□□□□□ -1.14
TDP1-212ENST00000555565 GPR146Q96CH1 333 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 RARRES2Q99969 163 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 NAA60Q9H7X0 242 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.9□□□□□ -1.14
TDP1-212ENST00000555565 GPR132Q9UNW8 380 aa7.9□□□□□ -1.14
TDP1-212ENST00000555565 C14orf166Q9Y224 244 aaKnown RBP7.9□□□□□ -1.14
TDP1-212ENST00000555565 CRYM-AS1A6NIL9 109 aa7.89□□□□□ -1.15
TDP1-212ENST00000555565 DISC1C4P0D8 188 aa7.89□□□□□ -1.15
TDP1-212ENST00000555565 CTDSPLO15194 276 aa7.89□□□□□ -1.15
TDP1-212ENST00000555565 CA1P00915 261 aaPredicted RBP7.89□□□□□ -1.15
TDP1-212ENST00000555565 AKAIN1P0CW23 69 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms