RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 MRPL27Q9P0M9 148 aaKnown RBP10.33□□□□□ -0.76
SHMT2-219ENST00000555563 HSPB7Q9UBY9 170 aa10.33□□□□□ -0.76
SHMT2-219ENST00000555563 CACFD1Q9UGQ2 172 aa10.33□□□□□ -0.76
SHMT2-219ENST00000555563 A0A1B0GU03 582 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 A6NHS1 94 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 C15orf62A8K5M9 175 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 SCAF4O95104 1147 aaKnown RBP10.32□□□□□ -0.76
SHMT2-219ENST00000555563 CD7P09564 240 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 NHLRC4P0CG21 123 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-219ENST00000555563 NPBWR1P48145 328 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 UBE2MP61081 183 aaKnown RBP10.32□□□□□ -0.76
SHMT2-219ENST00000555563 CNPY1Q3B7I2 92 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 C2orf83Q53S99 150 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 OR1S1Q8NH92 325 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 TMEM170AQ8WVE7 144 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 NEURL2Q9BR09 285 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 C7orf50Q9BRJ6 194 aaKnown RBP10.32□□□□□ -0.76
SHMT2-219ENST00000555563 C19orf73Q9NVV2 129 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 FLVCR2Q9UPI3 526 aa10.32□□□□□ -0.76
SHMT2-219ENST00000555563 NBEAL2Q6ZNJ1 2754 aa10.31□□□□□ -0.76
SHMT2-219ENST00000555563 CENPXA8MT69 81 aa10.31□□□□□ -0.76
SHMT2-219ENST00000555563 A8MZ25 164 aa10.31□□□□□ -0.76
SHMT2-219ENST00000555563 K7EMT4 169 aa10.31□□□□□ -0.76
SHMT2-219ENST00000555563 YIF1AO95070 293 aa10.31□□□□□ -0.76
SHMT2-219ENST00000555563 NPY1RP25929 384 aa10.31□□□□□ -0.76
SHMT2-219ENST00000555563 MLANAQ16655 118 aa10.31□□□□□ -0.76
SHMT2-219ENST00000555563 DTD1Q8TEA8 209 aa10.31□□□□□ -0.76
SHMT2-219ENST00000555563 WFDC10AQ9H1F0 79 aa10.31□□□□□ -0.76
SHMT2-219ENST00000555563 HIPK2Q9H2X6 1198 aa10.31□□□□□ -0.76
SHMT2-219ENST00000555563 RBKSQ9H477 322 aa10.31□□□□□ -0.76
SHMT2-219ENST00000555563 RPS10-NUDT3A0A1W2PQS6 291 aa10.3□□□□□ -0.76
SHMT2-219ENST00000555563 PLA2G10O15496 165 aa10.3□□□□□ -0.76
SHMT2-219ENST00000555563 PITX3O75364 302 aa10.3□□□□□ -0.76
SHMT2-219ENST00000555563 CLN5O75503 358 aa10.3□□□□□ -0.76
SHMT2-219ENST00000555563 ANXA7P20073 488 aaKnown RBP10.3□□□□□ -0.76
SHMT2-219ENST00000555563 OR4X1Q8NH49 305 aa10.3□□□□□ -0.76
SHMT2-219ENST00000555563 RNASEH2CQ8TDP1 164 aaKnown RBP10.3□□□□□ -0.76
SHMT2-219ENST00000555563 OR10C1Q96KK4 312 aa10.3□□□□□ -0.76
SHMT2-219ENST00000555563 TMED3Q9Y3Q3 217 aa10.3□□□□□ -0.76
SHMT2-219ENST00000555563 U3KQK5 164 aa10.3□□□□□ -0.76
SHMT2-219ENST00000555563 IGHV3-49A0A0A0MS15 119 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 TRAV25A0A0B4J276 109 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 IGHV7-4-1A0A0J9YVY3 117 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 C9orf170A2RU37 121 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 LYRM1O43325 122 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 TMEM50AO95807 157 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 HOXB5P09067 269 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 SLC25A6P12236 298 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 DHRS2Q13268 280 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 TOMM20LQ6UXN7 152 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 ZNF600Q6ZNG1 722 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 RBPMS2Q6ZRY4 209 aaKnown RBP10.29□□□□□ -0.76
SHMT2-219ENST00000555563 LINC00299Q6ZSB3 139 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 LYG2Q86SG7 212 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 CCDC32Q9BV29 185 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 C20orf85Q9H1P6 137 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 TUBA4BQ9H853 241 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 ZFAND3Q9H8U3 227 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 PUS1Q9Y606 427 aaKnown RBP eCLIP10.29□□□□□ -0.76
SHMT2-219ENST00000555563 RYR3Q15413 4870 aa10.29□□□□□ -0.76
SHMT2-219ENST00000555563 ADAP1O75689 374 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 IFNA10P01566 189 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 IGKV1-17P01599 117 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 OR4E1P0C645 316 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 SLC25A4P12235 298 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 RND2P52198 227 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 C4orf46Q504U0 113 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 GGNBP1Q5YKI7 109 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 PRSS54Q6PEW0 395 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 SLC16A13Q7RTY0 426 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 DEFB125Q8N687 156 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 TMEM116Q8NCL8 245 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 OR52B4Q8NGK2 314 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 COQ8AQ8NI60 647 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 GINS3Q9BRX5 216 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 PTTG2Q9NZH5 202 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 SMPXQ9UHP9 88 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 U3KQ87 197 aa10.28□□□□□ -0.76
SHMT2-219ENST00000555563 CHEK1O14757 476 aa10.27□□□□□ -0.77
SHMT2-219ENST00000555563 TSPAN4O14817 238 aa10.27□□□□□ -0.77
SHMT2-219ENST00000555563 SCGB2A1O75556 95 aa10.27□□□□□ -0.77
SHMT2-219ENST00000555563 IGLC1P0CG04 106 aa10.27□□□□□ -0.77
SHMT2-219ENST00000555563 IAPPP10997 89 aa10.27□□□□□ -0.77
SHMT2-219ENST00000555563 TIGITQ495A1 244 aa10.27□□□□□ -0.77
SHMT2-219ENST00000555563 NOXA1Q86UR1 476 aa10.27□□□□□ -0.77
SHMT2-219ENST00000555563 S100ZQ8WXG8 99 aa10.27□□□□□ -0.77
SHMT2-219ENST00000555563 RNF2Q99496 336 aa10.27□□□□□ -0.77
SHMT2-219ENST00000555563 SPAG8Q99932 426 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-219ENST00000555563 RHPN1-AS1Q9BWJ2 59 aa10.27□□□□□ -0.77
SHMT2-219ENST00000555563 SRD5A3Q9H8P0 318 aa10.27□□□□□ -0.77
SHMT2-219ENST00000555563 IGHV3OR16-13A0A075B7E8 117 aa10.26□□□□□ -0.77
SHMT2-219ENST00000555563 TRAV14DV4A0A0A6YYC5 116 aa10.26□□□□□ -0.77
SHMT2-219ENST00000555563 IGHV3-74A0A0B4J1X5 117 aa10.26□□□□□ -0.77
SHMT2-219ENST00000555563 MPTX1A8MV57 137 aa10.26□□□□□ -0.77
SHMT2-219ENST00000555563 OR11H12B2RN74 326 aa10.26□□□□□ -0.77
SHMT2-219ENST00000555563 FAM90A26D6RGX4 464 aa10.26□□□□□ -0.77
SHMT2-219ENST00000555563 HAGHQ16775 308 aa10.26□□□□□ -0.77
SHMT2-219ENST00000555563 LAMTOR1Q6IAA8 161 aa10.26□□□□□ -0.77
SHMT2-219ENST00000555563 ETFRF1Q6IPR1 90 aa10.26□□□□□ -0.77
SHMT2-219ENST00000555563 OR1S2Q8NGQ3 325 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms