RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 NEURL2Q9BR09 285 aa10.25□□□□□ -0.77
SNX6-203ENST00000555416 HEYLQ9NQ87 328 aaPredicted RBP10.25□□□□□ -0.77
SNX6-203ENST00000555416 DAZ1Q9NQZ3 744 aaKnown RBP10.25□□□□□ -0.77
SNX6-203ENST00000555416 MRPL27Q9P0M9 148 aaKnown RBP10.25□□□□□ -0.77
SNX6-203ENST00000555416 HUWE1Q7Z6Z7 4374 aaKnown RBP10.25□□□□□ -0.77
SNX6-203ENST00000555416 A6NHS1 94 aa10.24□□□□□ -0.77
SNX6-203ENST00000555416 PLA2G10O15496 165 aa10.24□□□□□ -0.77
SNX6-203ENST00000555416 GNG7O60262 68 aa10.24□□□□□ -0.77
SNX6-203ENST00000555416 PITX3O75364 302 aa10.24□□□□□ -0.77
SNX6-203ENST00000555416 TMEM50AO95807 157 aa10.24□□□□□ -0.77
SNX6-203ENST00000555416 RBMS2Q15434 407 aaKnown RBP10.24□□□□□ -0.77
SNX6-203ENST00000555416 CENPSQ8N2Z9 138 aa10.24□□□□□ -0.77
SNX6-203ENST00000555416 LRTM2Q8N967 370 aa10.24□□□□□ -0.77
SNX6-203ENST00000555416 MARC2Q969Z3 335 aa10.24□□□□□ -0.77
SNX6-203ENST00000555416 OR10C1Q96KK4 312 aa10.24□□□□□ -0.77
SNX6-203ENST00000555416 RBKSQ9H477 322 aa10.24□□□□□ -0.77
SNX6-203ENST00000555416 HSPB7Q9UBY9 170 aa10.24□□□□□ -0.77
SNX6-203ENST00000555416 IGHV3OR16-13A0A075B7E8 117 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 IGHV3-74A0A0B4J1X5 117 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 A0A1B0GU03 582 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 RBMY1BA6NDE4 496 aaKnown RBP10.23□□□□□ -0.77
SNX6-203ENST00000555416 RBMY1EA6NEQ0 496 aaKnown RBP10.23□□□□□ -0.77
SNX6-203ENST00000555416 C15orf62A8K5M9 175 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 K7EMT4 169 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 YIF1AO95070 293 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 RBMY1DP0C7P1 496 aaKnown RBP10.23□□□□□ -0.77
SNX6-203ENST00000555416 ANXA3P12429 323 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 OPRK1P41145 380 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 HTR2BP41595 481 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 INPP1P49441 399 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 SUB1P53999 127 aaKnown RBP eCLIP10.23□□□□□ -0.77
SNX6-203ENST00000555416 SRPXP78539 464 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 HAGHQ16775 308 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 C2orf83Q53S99 150 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 TOMM20LQ6UXN7 152 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 LINC00322Q6ZN03 302 aaPredicted RBP10.23□□□□□ -0.77
SNX6-203ENST00000555416 DUSP18Q8NEJ0 188 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 SLC24A4Q8NFF2 622 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 GAR1Q9NY12 217 aaKnown RBP10.23□□□□□ -0.77
SNX6-203ENST00000555416 SMPXQ9UHP9 88 aa10.23□□□□□ -0.77
SNX6-203ENST00000555416 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 C9orf170A2RU37 121 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 NAP1L6A6NFF2 107 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 OR11H12B2RN74 326 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 CHEK1O14757 476 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 IGKV1-17P01599 117 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 APOHP02749 345 aaPredicted RBP10.22□□□□□ -0.77
SNX6-203ENST00000555416 ANXA7P20073 488 aaKnown RBP10.22□□□□□ -0.77
SNX6-203ENST00000555416 NPBWR1P48145 328 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 RELQ04864 619 aaPredicted RBP10.22□□□□□ -0.77
SNX6-203ENST00000555416 CNPY1Q3B7I2 92 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 LILRB2Q8N423 598 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 OR4X1Q8NH49 305 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 CITED4Q96RK1 184 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 RNF2Q99496 336 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 TM2D3Q9BRN9 247 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 TUBA4BQ9H853 241 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 ZFAND3Q9H8U3 227 aa10.22□□□□□ -0.77
SNX6-203ENST00000555416 PUS1Q9Y606 427 aaKnown RBP eCLIP10.22□□□□□ -0.77
SNX6-203ENST00000555416 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 CORTO00230 105 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 CLN5O75503 358 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 ADAP1O75689 374 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 HOXB5P09067 269 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 NPY1RP25929 384 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 RND2P52198 227 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 TIGITQ495A1 244 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 GGNBP1Q5YKI7 109 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 PRSS54Q6PEW0 395 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 OR52B4Q8NGK2 314 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 OR1S1Q8NH92 325 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 DTD1Q8TEA8 209 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 RCHY1Q96PM5 261 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 RHPN1-AS1Q9BWJ2 59 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 SRD5A3Q9H8P0 318 aa10.21□□□□□ -0.77
SNX6-203ENST00000555416 TRAV25A0A0B4J276 109 aa10.2□□□□□ -0.78
SNX6-203ENST00000555416 IGHV3-66A0A0C4DH42 116 aa10.2□□□□□ -0.78
SNX6-203ENST00000555416 DUXBA0A1W2PPF3 345 aa10.2□□□□□ -0.78
SNX6-203ENST00000555416 MPTX1A8MV57 137 aa10.2□□□□□ -0.78
SNX6-203ENST00000555416 TSPAN4O14817 238 aa10.2□□□□□ -0.78
SNX6-203ENST00000555416 IAPPP10997 89 aa10.2□□□□□ -0.78
SNX6-203ENST00000555416 ZNF600Q6ZNG1 722 aa10.2□□□□□ -0.78
SNX6-203ENST00000555416 RBPMS2Q6ZRY4 209 aaKnown RBP10.2□□□□□ -0.78
SNX6-203ENST00000555416 TMEM116Q8NCL8 245 aa10.2□□□□□ -0.78
SNX6-203ENST00000555416 RNASEH2CQ8TDP1 164 aaKnown RBP10.2□□□□□ -0.78
SNX6-203ENST00000555416 WWC2-AS2Q96NR7 200 aa10.2□□□□□ -0.78
SNX6-203ENST00000555416 HIPK2Q9H2X6 1198 aa10.2□□□□□ -0.78
SNX6-203ENST00000555416 RETNQ9HD89 108 aa10.2□□□□□ -0.78
SNX6-203ENST00000555416 TRAV14DV4A0A0A6YYC5 116 aa10.19□□□□□ -0.78
SNX6-203ENST00000555416 IFNA10P01566 189 aa10.19□□□□□ -0.78
SNX6-203ENST00000555416 OR4E1P0C645 316 aa10.19□□□□□ -0.78
SNX6-203ENST00000555416 IGLC1P0CG04 106 aa10.19□□□□□ -0.78
SNX6-203ENST00000555416 SLC25A6P12236 298 aa10.19□□□□□ -0.78
SNX6-203ENST00000555416 UBE2MP61081 183 aaKnown RBP10.19□□□□□ -0.78
SNX6-203ENST00000555416 DHRS2Q13268 280 aa10.19□□□□□ -0.78
SNX6-203ENST00000555416 FAM90A2PQ658T7 463 aa10.19□□□□□ -0.78
SNX6-203ENST00000555416 ST8SIA2Q92186 375 aa10.19□□□□□ -0.78
SNX6-203ENST00000555416 NPIPB3Q92617 1050 aa10.19□□□□□ -0.78
SNX6-203ENST00000555416 C7orf50Q9BRJ6 194 aaKnown RBP10.19□□□□□ -0.78
SNX6-203ENST00000555416 MAGT1Q9H0U3 335 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms