RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CLEC19AQ6UXS0 136 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 TMEM116Q8NCL8 245 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 WFDC9Q8NEX5 89 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 OR4X1Q8NH49 305 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 PINX1Q96BK5 328 aaKnown RBP9.76□□□□□ -0.85
SYNE2-219ENST00000555323 S4R3C0 116 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 ANK2Q01484 3957 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 IGHV3-21A0A0B4J1V1 117 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 ANKRD34BA5PLL1 514 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 E5RGE8 158 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 H3BP45 60 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 IGHV3-23P01764 117 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 CTSGP08311 255 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 OR8U8P0C7N1 319 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 LYL1P12980 280 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 ZP3P21754 424 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 NPBWR1P48145 328 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 S100A10P60903 97 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 PRR31Q5SQ13 230 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 PRSS54Q6PEW0 395 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 SPSB3Q6PJ21 355 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 CHAC2Q8WUX2 184 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 DPF1Q92782 380 aa9.75□□□□□ -0.85
SYNE2-219ENST00000555323 BSCL2Q96G97 398 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-219ENST00000555323 LYRM2Q9NU23 88 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-219ENST00000555323 MRPL36Q9P0J6 103 aaKnown RBP9.75□□□□□ -0.85
SYNE2-219ENST00000555323 BMPR1BO00238 502 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 TGOLN2O43493 480 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 GGCTO75223 188 aaKnown RBP9.74□□□□□ -0.85
SYNE2-219ENST00000555323 CLN5O75503 358 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 TSPAN15O95858 294 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 IGHV3-48P01763 117 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 PET100P0DJ07 73 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 P2RY1P47900 373 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 RAP2BP61225 183 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 KLF5Q13887 457 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-219ENST00000555323 LRRC37A5PQ49AS3 106 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 GPHB5Q86YW7 130 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 TMEM252Q8N6L7 170 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 LINC00482Q8N8I6 264 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 DUX3Q96PT4 197 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 OR5AC2Q9NZP5 309 aa9.74□□□□□ -0.85
SYNE2-219ENST00000555323 TRAV30A0A087WSZ9 112 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 TRAV14DV4A0A0A6YYC5 116 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 FAM24AA6NFZ4 105 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 FNDC10F2Z333 226 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 SCAF4O95104 1147 aaKnown RBP9.73□□□□□ -0.85
SYNE2-219ENST00000555323 METTL15P1P0C7V9 234 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 HOXD3P31249 432 aaPredicted RBP9.73□□□□□ -0.85
SYNE2-219ENST00000555323 GPR183P32249 361 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 ADMP35318 185 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 ARL3P36405 182 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 FGL1Q08830 312 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 GAMTQ14353 236 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 Q56UQ5 140 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 ACSM6Q6P461 480 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 SLC16A13Q7RTY0 426 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 OR10P1Q8NGE3 313 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 GGACTQ9BVM4 153 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 TRRAPQ9Y4A5 3859 aa9.73□□□□□ -0.85
SYNE2-219ENST00000555323 DNHD1Q96M86 4753 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 OR2T8A6NH00 312 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 PPP5D1E7EU14 171 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 NUPL2O15504 423 aaKnown RBP9.72□□□□□ -0.85
SYNE2-219ENST00000555323 GNG7O60262 68 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 OR2C1O95371 312 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 PF4P02776 101 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 BCAP31P51572 246 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 CAV2P51636 162 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 DLK1P80370 383 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 ARL16Q0P5N6 197 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 Q5BKY6 102 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 HAPLN4Q86UW8 402 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 DLX4Q92988 240 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-219ENST00000555323 ZNF414Q96IQ9 312 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 CHRDL1Q9BU40 450 aa9.72□□□□□ -0.85
SYNE2-219ENST00000555323 PAIP2BQ9ULR5 123 aaKnown RBP9.72□□□□□ -0.85
SYNE2-219ENST00000555323 LGALS9O00182 355 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 CCNKO75909 580 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 IGKV1-17P01599 117 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 IGLC1P0CG04 106 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 SULT1A1P50225 295 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 RND2P52198 227 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 SLURP1P55000 103 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 RPEL1Q2QD12 228 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 OR8G2PQ6IF36 304 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 TMEM144Q7Z5S9 345 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 UBAC2Q8NBM4 344 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 THAP6Q8TBB0 222 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 DCUN1D4Q92564 292 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 NPIPB3Q92617 1050 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 SLC25A31Q9H0C2 315 aa9.71□□□□□ -0.86
SYNE2-219ENST00000555323 IGSF23A1L1A6 192 aa9.7□□□□□ -0.86
SYNE2-219ENST00000555323 G3V3Q6 166 aa9.7□□□□□ -0.86
SYNE2-219ENST00000555323 NDUFA4O00483 81 aa9.7□□□□□ -0.86
SYNE2-219ENST00000555323 S100A11P31949 105 aa9.7□□□□□ -0.86
SYNE2-219ENST00000555323 YPEL3P61236 119 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-219ENST00000555323 RELQ04864 619 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-219ENST00000555323 BAXQ07812 192 aa9.7□□□□□ -0.86
SYNE2-219ENST00000555323 FAM106AQ4KMX7 169 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms