RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SLC35A2P78381 396 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 BTN3A2P78410 334 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 DEFB109BQ30KR1 87 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 SDIM1Q6ZPB5 146 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 MORN4Q8NDC4 146 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 ABHD14BQ96IU4 210 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 PPP3R2Q96LZ3 170 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 EIF5A2Q9GZV4 153 aaKnown RBP2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 CENPHQ9H3R5 247 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 FLNCQ14315 2725 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 MTORP42345 2549 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 EML5Q05BV3 1969 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 PCNX1Q96RV3 2341 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 DMXL2Q8TDJ6 3036 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 FREM2Q5SZK8 3169 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 NBEAL2Q6ZNJ1 2754 aa2.4□□□□□ -2.02
CKS1BP1-201ENST00000555221 PTPRQQ9UMZ3 2332 aa2.4□□□□□ -2.02
CKS1BP1-201ENST00000555221 FABP12A6NFH5 140 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 ACOX3O15254 700 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 BANF1O75531 89 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 KLF7O75840 302 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 SERPINE1P05121 402 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 IFI6P09912 130 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 IGHV3-30-3P0DP02 117 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 CD99P14209 185 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 GZMHP20718 246 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 HIST1H1TP22492 207 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 FKBP2P26885 142 aaKnown RBP2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 SSR2P43308 183 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 MAGEA12P43365 314 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 GABRA4P48169 554 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 RPL14P50914 215 aaKnown RBP2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR4D2P58180 307 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 ACTBP60709 375 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 ACTG1P63261 375 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 MRPS25P82663 173 aaKnown RBP2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 REEP5Q00765 189 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 GNA13Q14344 377 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 TBC1D28Q2M2D7 210 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 PLEKHG7Q6ZR37 379 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 Q6ZRU5 148 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 RPS19BP1Q86WX3 136 aaKnown RBP2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 TMEM156Q8N614 296 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 CT55Q8WUE5 264 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 DYDC1Q8WWB3 177 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 MS4A6EQ96DS6 147 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR7D2Q96RA2 312 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 STACQ99469 402 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZNF426Q9BUY5 554 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 C1QTNF6Q9BXI9 259 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 AICDAQ9GZX7 198 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 MED28Q9H204 178 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 CACYBPQ9HB71 228 aaKnown RBP2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 PRTFDC1Q9NRG1 225 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 SPANXB1Q9NS25 103 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 TAS2R7Q9NYW3 318 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 PCYT1BQ9Y5K3 369 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 STAB1Q9NY15 2570 aa2.4□□□□□ -2.03
CKS1BP1-201ENST00000555221 PRRC2CQ9Y520 2896 aaKnown RBP2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 LINC00862A6NCI5 91 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 METTL15A6NJ78 407 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 SMIM23A6NLE4 172 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 A8MT66 165 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 AZIN1O14977 448 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 C1QAP02745 245 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 BPGMP07738 259 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 RPS17P08708 135 aaKnown RBP2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR13C7P0DN81 318 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 CDK2P24941 298 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 ATP6V0CP27449 155 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 PEBP1P30086 187 aaKnown RBP2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 GRPRP30550 384 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 CA5AP35218 305 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 SLCO1A2P46721 670 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 HLA-DRB5Q30154 266 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 CCSMST1Q4G0I0 132 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 MRPL51Q4U2R6 128 aaKnown RBP2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR5C1Q8NGR4 320 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 CYGBQ8WWM9 190 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 POP5Q969H6 163 aaKnown RBP2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 ACY3Q96HD9 319 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 PAIP2Q9BPZ3 127 aaKnown RBP2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 SMDT1Q9H4I9 107 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 PCTPQ9UKL6 214 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 RNF11Q9Y3C5 154 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 MRPS16Q9Y3D3 137 aaKnown RBP2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 TNRC6BQ9UPQ9 1833 aaKnown RBP2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 FN1P02751 2386 aaKnown RBP2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 COL6A6A6NMZ7 2263 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 PLXNA2O75051 1894 aa2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 FBN1P35555 2871 aaKnown RBP2.39□□□□□ -2.03
CKS1BP1-201ENST00000555221 J3QKU1 62 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 KRT75O95678 551 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 IL6P05231 212 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 CRYBA1P05813 215 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 LINC00614P0C842 121 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 CPMP14384 443 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 IDO1P14902 403 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 HIST1H1CP16403 213 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms