RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 RITA1Q96K30 269 aa17.09■□□□□ 0.33
ARHGEF40-204ENST00000555038 ANKHD1Q8IWZ3 2542 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-204ENST00000555038 LY6LH3BQJ8 138 aa17.08■□□□□ 0.33
ARHGEF40-204ENST00000555038 OR10G8Q8NGN5 311 aa17.08■□□□□ 0.33
ARHGEF40-204ENST00000555038 NPIPB3Q92617 1050 aa17.08■□□□□ 0.33
ARHGEF40-204ENST00000555038 SRSF8Q9BRL6 282 aaKnown RBP17.08■□□□□ 0.33
ARHGEF40-204ENST00000555038 IGHV3-72A0A0B4J1Y9 119 aa17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 IFITM10A6NMD0 228 aa17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 COX7A2P2O60397 106 aa17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 CDSNQ15517 529 aa17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 COA6Q5JTJ3 125 aaKnown RBP17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 ACTL10Q5JWF8 245 aa17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 OR1P1Q8NH06 330 aa17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 IGKV1D-37A0A075B6S9 117 aa17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 TNXAQ16473 311 aa17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 PPP1R27Q86WC6 154 aa17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 FAM167A-AS1Q96KT0 104 aa17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 ADGRG4Q8IZF6 3080 aa17.07■□□□□ 0.32
ARHGEF40-204ENST00000555038 M0R1W7 72 aa17.06■□□□□ 0.32
ARHGEF40-204ENST00000555038 C10orf113Q5VZT2 155 aa17.06■□□□□ 0.32
ARHGEF40-204ENST00000555038 EAF1Q96JC9 268 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-204ENST00000555038 SLC25A2Q9BXI2 301 aa17.06■□□□□ 0.32
ARHGEF40-204ENST00000555038 PGPEP1LA6NFU8 196 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 COX7A1P24310 79 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 C4orf17Q53FE4 359 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 OR11H6Q8NGC7 330 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 TRGV9Q99603 122 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 NIT2Q9NQR4 276 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 HELTA6NFD8 242 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 SOD3P08294 240 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 DTX2Q86UW9 622 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 TMEM183AQ8IXX5 376 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 TMEM116Q8NCL8 245 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 STXBP6Q8NFX7 210 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 SGMS2Q8NHU3 365 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 ONECUT1Q9UBC0 465 aa17.05■□□□□ 0.32
ARHGEF40-204ENST00000555038 GNG4P50150 75 aa17.04■□□□□ 0.32
ARHGEF40-204ENST00000555038 UBE2L3P68036 154 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-204ENST00000555038 TPTE2P1Q5T6R2 138 aa17.04■□□□□ 0.32
ARHGEF40-204ENST00000555038 OR51M1Q9H341 326 aa17.04■□□□□ 0.32
ARHGEF40-204ENST00000555038 AURKAIP1Q9NWT8 199 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF40-204ENST00000555038 MALRD1Q5VYJ5 2156 aa17.04■□□□□ 0.32
ARHGEF40-204ENST00000555038 SPTA1P02549 2419 aa17.04■□□□□ 0.32
ARHGEF40-204ENST00000555038 C22orf46C9J442 243 aa17.03■□□□□ 0.32
ARHGEF40-204ENST00000555038 OR10J4P0C629 311 aa17.03■□□□□ 0.32
ARHGEF40-204ENST00000555038 CRYBB3P26998 211 aa17.03■□□□□ 0.32
ARHGEF40-204ENST00000555038 CEACAM3P40198 252 aa17.03■□□□□ 0.32
ARHGEF40-204ENST00000555038 DNLZQ5SXM8 178 aa17.03■□□□□ 0.32
ARHGEF40-204ENST00000555038 OR5AU1Q8NGC0 362 aa17.03■□□□□ 0.32
ARHGEF40-204ENST00000555038 GPR61Q9BZJ8 451 aa17.03■□□□□ 0.32
ARHGEF40-204ENST00000555038 IL36BQ9NZH7 164 aa17.03■□□□□ 0.32
ARHGEF40-204ENST00000555038 F11RQ9Y624 299 aaKnown RBP17.03■□□□□ 0.32
ARHGEF40-204ENST00000555038 GGTLC3B5MD39 225 aa17.02■□□□□ 0.32
ARHGEF40-204ENST00000555038 HTR1DP28221 377 aa17.02■□□□□ 0.32
ARHGEF40-204ENST00000555038 SSBP2P81877 361 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF40-204ENST00000555038 TNFRSF19Q9NS68 423 aa17.02■□□□□ 0.32
ARHGEF40-204ENST00000555038 ZNF355PQ9NSJ1 428 aa17.02■□□□□ 0.32
ARHGEF40-204ENST00000555038 DPM3Q9P2X0 92 aa17.02■□□□□ 0.32
ARHGEF40-204ENST00000555038 NCOR2Q9Y618 2525 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 A0A0U1RQK1 487 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 ZNF320A2RRD8 509 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 TEX22C9J3V5 150 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 K7EN84 100 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 REG1AP05451 166 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 CNTFRP26992 372 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 PDLIM4P50479 330 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 ZNF90Q03938 601 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 CENPWQ5EE01 88 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 MISP3Q96FF7 219 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 PERPQ96FX8 193 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 PAXXQ9BUH6 204 aa17.02■□□□□ 0.31
ARHGEF40-204ENST00000555038 SMG1Q96Q15 3661 aaKnown RBP17.01■□□□□ 0.31
ARHGEF40-204ENST00000555038 TAS2R60P59551 318 aa17.01■□□□□ 0.31
ARHGEF40-204ENST00000555038 RPL15P61313 204 aaKnown RBP17.01■□□□□ 0.31
ARHGEF40-204ENST00000555038 CLEC12BQ2HXU8 276 aa17.01■□□□□ 0.31
ARHGEF40-204ENST00000555038 TIGITQ495A1 244 aa17.01■□□□□ 0.31
ARHGEF40-204ENST00000555038 HCP5Q6MZN7 132 aa17.01■□□□□ 0.31
ARHGEF40-204ENST00000555038 PATE2Q6UY27 113 aa17.01■□□□□ 0.31
ARHGEF40-204ENST00000555038 C1orf122Q6ZSJ8 110 aa17.01■□□□□ 0.31
ARHGEF40-204ENST00000555038 SSBP3Q9BWW4 388 aaPredicted RBP17.01■□□□□ 0.31
ARHGEF40-204ENST00000555038 MRPL36Q9P0J6 103 aaKnown RBP17.01■□□□□ 0.31
ARHGEF40-204ENST00000555038 LOC105371242A0A075B767 164 aa17■□□□□ 0.31
ARHGEF40-204ENST00000555038 PRTN3P24158 256 aa17■□□□□ 0.31
ARHGEF40-204ENST00000555038 MFAP2P55001 183 aa17■□□□□ 0.31
ARHGEF40-204ENST00000555038 DLX1P56177 255 aa17■□□□□ 0.31
ARHGEF40-204ENST00000555038 SUMO1P63165 101 aaKnown RBP17■□□□□ 0.31
ARHGEF40-204ENST00000555038 GFI1BQ5VTD9 330 aa17■□□□□ 0.31
ARHGEF40-204ENST00000555038 IGF2RP11717 2491 aa17■□□□□ 0.31
ARHGEF40-204ENST00000555038 PLP1P60201 277 aa17■□□□□ 0.31
ARHGEF40-204ENST00000555038 KIR3DL3Q8N743 410 aa17■□□□□ 0.31
ARHGEF40-204ENST00000555038 OR10D4PQ8NGN7 298 aa17■□□□□ 0.31
ARHGEF40-204ENST00000555038 SRSF12Q8WXF0 261 aaKnown RBP17■□□□□ 0.31
ARHGEF40-204ENST00000555038 OSTCQ9NRP0 149 aa17■□□□□ 0.31
ARHGEF40-204ENST00000555038 XKRY2A2RUG3 117 aa16.99■□□□□ 0.31
ARHGEF40-204ENST00000555038 YPEL3P61236 119 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF40-204ENST00000555038 RPL19P84098 196 aaKnown RBP16.99■□□□□ 0.31
ARHGEF40-204ENST00000555038 MORN5Q5VZ52 161 aa16.99■□□□□ 0.31
ARHGEF40-204ENST00000555038 FBXL15Q9H469 300 aa16.99■□□□□ 0.31
ARHGEF40-204ENST00000555038 PRORYQ9H606 182 aa16.99■□□□□ 0.31
ARHGEF40-204ENST00000555038 TRAV5A0A0B4J249 113 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms