RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 DLX1P56177 255 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 SMIM15Q7Z3B0 74 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 TMEM251Q8N6I4 163 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 AP1S3Q96PC3 154 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 TMEM70Q9BUB7 260 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 ZNF835Q9Y2P0 537 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 SMPD2O60906 423 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 SLC25A5P05141 298 aaKnown RBP7.28□□□□□ -1.24
SYNE2-217ENST00000555022 ARR3P36575 388 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 RAB30Q15771 203 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 ABHD17BQ5VST6 288 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 SLC25A34Q6PIV7 304 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 C16orf54Q6UWD8 224 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 CD177Q8N6Q3 437 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 KLF14Q8TD94 323 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-217ENST00000555022 AMMECR1Q9Y4X0 333 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-217ENST00000555022 TRGV10A0A0A0MS01 117 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 IGHV3-72A0A0B4J1Y9 119 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 SPRY3O43610 288 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 LEPROTL1O95214 131 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 IGKV1-16P04430 117 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 BVES-AS1Q5T3Y7 98 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 TMEM108Q6UXF1 575 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 MBNL3Q9NUK0 354 aaKnown RBP7.27□□□□□ -1.25
SYNE2-217ENST00000555022 OR51B2Q9Y5P1 312 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 J3QR06 171 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 IGLV2-8P01709 118 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 LINC00869P0C866 280 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 VDAC2P45880 294 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-217ENST00000555022 TTTY12Q9BZ98 90 aa7.27□□□□□ -1.25
SYNE2-217ENST00000555022 BOKQ9UMX3 212 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-217ENST00000555022 A0A1W2PRE2 83 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 COX7A2P2O60397 106 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 ARF6P62330 175 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 SSPNQ14714 243 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 HCP5Q6MZN7 132 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 TTTY13Q9BZ97 58 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 SERTM2A0A1B0GWG4 89 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 C7orf71A4D174 169 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 FAM231BA6NCW3 169 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 IZUMO1RA6ND01 250 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 GAGE10A6NGK3 116 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 NCR2O95944 276 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 LINC00322Q6ZN03 302 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-217ENST00000555022 MAFAQ8NHW3 353 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-217ENST00000555022 IGFBPL1Q8WX77 278 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 PKIBQ9C010 78 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 IGHV1-24A0A0C4DH33 117 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 C2orf70A6NJV1 201 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 CHEK1O14757 476 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 MMP23AO75900 390 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 TOMM40O96008 361 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 TMEM177Q53S58 311 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 OR10J3Q5JRS4 329 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 SLC35E4Q6ICL7 350 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 ACP7Q6ZNF0 438 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 MOGAT3Q86VF5 341 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 OR1B1Q8NGR6 318 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 OR1N2Q8NGR9 330 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 URB1-AS1Q96HZ7 61 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 TMUB1Q9BVT8 246 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 S4R3C0 116 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 DSCAML1Q8TD84 2053 aa7.26□□□□□ -1.25
SYNE2-217ENST00000555022 COL5A1P20908 1838 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-217ENST00000555022 TRBV6-6A0A0A6YYG2 114 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 TMEM238C9JI98 176 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 MT-ND6P03923 174 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 ESDP10768 282 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 PRDX2P32119 198 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 WDR82Q6UXN9 313 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 NPIPB3Q92617 1050 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 TRAV30A0A087WSZ9 112 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 SAA2-SAA4A0A096LPE2 208 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 PGPA6NDG6 321 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 FAM106CPP0CH98 169 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 SAA2P0DJI9 122 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-217ENST00000555022 ACP1P24666 158 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 NMUP48645 174 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 SRSF7Q16629 238 aaKnown RBP eCLIP7.25□□□□□ -1.25
SYNE2-217ENST00000555022 FAM106AQ4KMX7 169 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 LCNL1Q6ZST4 164 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 ZCCHC24Q8N2G6 241 aaKnown RBP7.25□□□□□ -1.25
SYNE2-217ENST00000555022 SAP30LQ9HAJ7 183 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 MRPS16Q9Y3D3 137 aaKnown RBP7.25□□□□□ -1.25
SYNE2-217ENST00000555022 ABCA4P78363 2273 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 SRFP11831 508 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 TBR1Q16650 682 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 CORO2AQ92828 525 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 GTSF1LQ9H1H1 148 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 SH3BGRL2Q9UJC5 107 aa7.25□□□□□ -1.25
SYNE2-217ENST00000555022 ZGRF1Q86YA3 2104 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 hADV38S2A0JD32 116 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 SRRM4A7MD48 611 aaKnown RBP7.24□□□□□ -1.25
SYNE2-217ENST00000555022 SYS1-DBNDD2H3BUS1 97 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 ERVK11-1P61568 191 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 MORN2Q502X0 79 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 CIARTQ8N365 385 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-217ENST00000555022 RBMXL3Q8N7X1 1067 aaKnown RBP7.24□□□□□ -1.25
SYNE2-217ENST00000555022 JMJD8Q96S16 334 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 PAXXQ9BUH6 204 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms