RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 A0A1W2PRX2 142 aa12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 PMS2P5A8MQ11 134 aa12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 PRSS46E5RG02 174 aa12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 HSPB1P04792 205 aaKnown RBP12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 SPSB3Q6PJ21 355 aa12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 C8orf86Q6ZUL3 223 aa12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 STX12Q86Y82 276 aa12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 TMEM252Q8N6L7 170 aa12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 TMEM116Q8NCL8 245 aa12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 OR4X1Q8NH49 305 aa12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 BSCL2Q96G97 398 aaPredicted RBP12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 GGACTQ9BVM4 153 aa12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 MBD2Q9UBB5 411 aa12.7□□□□□ -0.38
SPTLC2-203ENST00000554901 FNDC10F2Z333 226 aa12.69□□□□□ -0.38
SPTLC2-203ENST00000554901 M0QZ24 198 aa12.69□□□□□ -0.38
SPTLC2-203ENST00000554901 SCGB2A1O75556 95 aa12.69□□□□□ -0.38
SPTLC2-203ENST00000554901 METTL15P1P0C7V9 234 aa12.69□□□□□ -0.38
SPTLC2-203ENST00000554901 SULT1A1P50225 295 aa12.69□□□□□ -0.38
SPTLC2-203ENST00000554901 ACSM6Q6P461 480 aa12.69□□□□□ -0.38
SPTLC2-203ENST00000554901 C18orf65Q6ZTR6 163 aa12.69□□□□□ -0.38
SPTLC2-203ENST00000554901 SLC16A13Q7RTY0 426 aa12.69□□□□□ -0.38
SPTLC2-203ENST00000554901 DCUN1D4Q92564 292 aa12.69□□□□□ -0.38
SPTLC2-203ENST00000554901 OR5B12Q96R08 314 aa12.69□□□□□ -0.38
SPTLC2-203ENST00000554901 hCG_2014768A0A024R1R8 64 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 TRAV14DV4A0A0A6YYC5 116 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 FAM24AA6NFZ4 105 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 CLEC3BP05452 202 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 ZP3P21754 424 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 MYCNOSP40205 109 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 HBG1P69891 147 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 HBG2P69892 147 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 BAXQ07812 192 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 ZNF616Q08AN1 781 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 FHL3Q13643 280 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 CLEC19AQ6UXS0 136 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 OR11H1Q8NG94 326 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 OR1N2Q8NGR9 330 aa12.68□□□□□ -0.38
SPTLC2-203ENST00000554901 TRAV30A0A087WSZ9 112 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 IGHV3-21A0A0B4J1V1 117 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 F8W735 103 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 LINC01619G3V211 115 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 CCL24O00175 119 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 CLN5O75503 358 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 DLK1P80370 383 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 Q56UQ5 140 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 HIST2H2BDQ6DRA6 164 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 OR8G2PQ6IF36 304 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 DPF1Q92782 380 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 SLC35E1Q96K37 410 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 S4R3C0 116 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 IGSF23A1L1A6 192 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 TGOLN2O43493 480 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 GNG7O60262 68 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 GGCTO75223 188 aaKnown RBP12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 IGHV3-23P01764 117 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 S100A11P31949 105 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 GPR183P32249 361 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 ARL3P36405 182 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 GAMTQ14353 236 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 MLANAQ16655 118 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 RAX2Q96IS3 184 aa12.67□□□□□ -0.38
SPTLC2-203ENST00000554901 IGHV4OR15-8A0A075B7B6 117 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 A0A087WW49 117 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 A0A1B0GVG6 124 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 ANKRD34BA5PLL1 514 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 BMPR1BO00238 502 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 NUPL2O15504 423 aaKnown RBP12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 CCNKO75909 580 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 CST7O76096 145 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 CTSGP08311 255 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 RND2P52198 227 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 EWSR1Q01844 656 aaKnown RBP eCLIP12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 ATP6V1FQ16864 119 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 ACOT7LQ6ZUV0 252 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 HAPLN4Q86UW8 402 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 TCTE3Q8IZS6 198 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 UBAC2Q8NBM4 344 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 ST6GAL2Q96JF0 529 aa12.66□□□□□ -0.38
SPTLC2-203ENST00000554901 OR2T8A6NH00 312 aa12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 G3V3Q6 166 aa12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 TRBV12-3P01733 135 aa12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 IGHV3-48P01763 117 aa12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 RPL12P30050 165 aaKnown RBP12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 NUP62P37198 522 aaPredicted RBP12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 SLC38A11Q08AI6 406 aa12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 DEFB136Q30KP8 78 aa12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 Q5BKY6 102 aa12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 AKAP14Q86UN6 197 aa12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 NPIPB3Q92617 1050 aa12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 MRPL36Q9P0J6 103 aaKnown RBP12.65□□□□□ -0.38
SPTLC2-203ENST00000554901 PF4P02776 101 aa12.64□□□□□ -0.39
SPTLC2-203ENST00000554901 RELQ04864 619 aaPredicted RBP12.64□□□□□ -0.39
SPTLC2-203ENST00000554901 ARL16Q0P5N6 197 aa12.64□□□□□ -0.39
SPTLC2-203ENST00000554901 RPEL1Q2QD12 228 aa12.64□□□□□ -0.39
SPTLC2-203ENST00000554901 TMEM144Q7Z5S9 345 aa12.64□□□□□ -0.39
SPTLC2-203ENST00000554901 ZNF546Q86UE3 836 aa12.64□□□□□ -0.39
SPTLC2-203ENST00000554901 GPHB5Q86YW7 130 aa12.64□□□□□ -0.39
SPTLC2-203ENST00000554901 OR1S2Q8NGQ3 325 aa12.64□□□□□ -0.39
SPTLC2-203ENST00000554901 ACY3Q96HD9 319 aa12.64□□□□□ -0.39
SPTLC2-203ENST00000554901 AQP10Q96PS8 301 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms