RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 C5orf64Q2M2E5 130 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 MTURNQ8N3F0 131 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 OR2Z1Q8NG97 314 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 OR52E5Q8NH55 327 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 GRAMD2BQ96HH9 432 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 IGHV3-64DA0A0J9YX35 117 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 TMPRSS3P57727 454 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 RPL30P62888 115 aaKnown RBP12.83□□□□□ -0.36
SYNE3-203ENST00000554873 LINC01545Q5VT33 79 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 C6orf15Q6UXA7 325 aaPredicted RBP12.83□□□□□ -0.36
SYNE3-203ENST00000554873 FOXI2Q6ZQN5 318 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 LRRC29Q8WV35 223 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 MBNL3Q9NUK0 354 aaKnown RBP12.83□□□□□ -0.36
SYNE3-203ENST00000554873 SPAARA0A1B0GVQ0 90 aa12.82□□□□□ -0.36
SYNE3-203ENST00000554873 CATR1Q13166 79 aa12.82□□□□□ -0.36
SYNE3-203ENST00000554873 C3AR1Q16581 482 aa12.82□□□□□ -0.36
SYNE3-203ENST00000554873 FAM53AQ6NSI3 398 aaPredicted RBP12.82□□□□□ -0.36
SYNE3-203ENST00000554873 SLC25A10Q9UBX3 287 aaPredicted RBP12.82□□□□□ -0.36
SYNE3-203ENST00000554873 RABAC1Q9UI14 185 aa12.82□□□□□ -0.36
SYNE3-203ENST00000554873 HSPB8Q9UJY1 196 aa12.82□□□□□ -0.36
SYNE3-203ENST00000554873 HILPDAQ9Y5L2 63 aa12.82□□□□□ -0.36
SYNE3-203ENST00000554873 CAMPP49913 170 aa12.82□□□□□ -0.36
SYNE3-203ENST00000554873 ERVK11-1P61568 191 aa12.82□□□□□ -0.36
SYNE3-203ENST00000554873 PSG5Q15238 335 aa12.82□□□□□ -0.36
SYNE3-203ENST00000554873 ATP5L2Q7Z4Y8 100 aa12.82□□□□□ -0.36
SYNE3-203ENST00000554873 RAB37Q96AX2 223 aa12.82□□□□□ -0.36
SYNE3-203ENST00000554873 MCRIP2Q9BUT9 160 aaKnown RBP12.82□□□□□ -0.36
SYNE3-203ENST00000554873 GEMIN7Q9H840 131 aaKnown RBP12.82□□□□□ -0.36
SYNE3-203ENST00000554873 FGF6P10767 208 aa12.81□□□□□ -0.36
SYNE3-203ENST00000554873 FAM231DQ6ZW35 169 aa12.81□□□□□ -0.36
SYNE3-203ENST00000554873 ZNF355PQ9NSJ1 428 aa12.81□□□□□ -0.36
SYNE3-203ENST00000554873 B4GALT7Q9UBV7 327 aa12.81□□□□□ -0.36
SYNE3-203ENST00000554873 KMT2EQ8IZD2 1858 aa12.81□□□□□ -0.36
SYNE3-203ENST00000554873 STPG3Q8N7X2 389 aa12.81□□□□□ -0.36
SYNE3-203ENST00000554873 NHLRC2Q8NBF2 726 aa12.81□□□□□ -0.36
SYNE3-203ENST00000554873 BLNKQ8WV28 456 aa12.81□□□□□ -0.36
SYNE3-203ENST00000554873 TTTY12Q9BZ98 90 aa12.81□□□□□ -0.36
SYNE3-203ENST00000554873 C12orf49Q9H741 205 aa12.81□□□□□ -0.36
SYNE3-203ENST00000554873 LSM4Q9Y4Z0 139 aaKnown RBP12.81□□□□□ -0.36
SYNE3-203ENST00000554873 URB1O60287 2271 aaKnown RBP12.81□□□□□ -0.36
SYNE3-203ENST00000554873 OR9G9P0C7N8 305 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 MDP1Q86V88 176 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 RTL8AQ9BWD3 113 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 DUSP13Q9UII6 198 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 C17orf98A8MV24 154 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 PRSS46E5RG02 174 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 H0Y8G0 127 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 FAM214BQ7L5A3 538 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 DPF1Q92782 380 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 IDI2-AS1Q9NZ38 188 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 A0A1B0GXF2 115 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 BRWD1-AS2P59051 145 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 ADAMTSL5Q6ZMM2 481 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 OR4A16Q8NH70 328 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 GCM1Q9NP62 436 aa12.8□□□□□ -0.36
SYNE3-203ENST00000554873 IGFBP2P18065 325 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 CEBPDP49716 269 aaPredicted RBP12.79□□□□□ -0.36
SYNE3-203ENST00000554873 AESQ08117 197 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 EIF4EBP1Q13541 118 aaPredicted RBP12.79□□□□□ -0.36
SYNE3-203ENST00000554873 ZNF146Q15072 292 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 MIR17HGQ75NE6 70 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 ZNF808Q8N4W9 903 aaPredicted RBP12.79□□□□□ -0.36
SYNE3-203ENST00000554873 LOXL2Q9Y4K0 774 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 GGTLC3B5MD39 225 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 COL8A2P25067 703 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 FOXA3P55318 350 aaPredicted RBP12.79□□□□□ -0.36
SYNE3-203ENST00000554873 OR1C1Q15619 314 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 ALKBH6Q3KRA9 238 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 SAMD5Q5TGI4 173 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 ABHD17BQ5VST6 288 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 Q8IYB0 196 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 SNRNP40Q96DI7 357 aaKnown RBP12.79□□□□□ -0.36
SYNE3-203ENST00000554873 C1orf159Q96HA4 380 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 TAAR6Q96RI8 345 aa12.79□□□□□ -0.36
SYNE3-203ENST00000554873 PSPNO60542 156 aa12.78□□□□□ -0.36
SYNE3-203ENST00000554873 TIMM23BQ5SRD1 257 aa12.78□□□□□ -0.36
SYNE3-203ENST00000554873 WDR31Q8NA23 367 aa12.78□□□□□ -0.36
SYNE3-203ENST00000554873 TEX45Q8NA69 505 aa12.78□□□□□ -0.36
SYNE3-203ENST00000554873 POLDIP2Q9Y2S7 368 aa12.78□□□□□ -0.36
SYNE3-203ENST00000554873 HIGD1CA8MV81 97 aa12.78□□□□□ -0.36
SYNE3-203ENST00000554873 LTC4SQ16873 150 aa12.78□□□□□ -0.36
SYNE3-203ENST00000554873 TMEM105Q8N8V8 129 aa12.78□□□□□ -0.36
SYNE3-203ENST00000554873 MED13Q9UHV7 2174 aa12.78□□□□□ -0.36
SYNE3-203ENST00000554873 FAM87AP0C7U9 286 aa12.77□□□□□ -0.36
SYNE3-203ENST00000554873 OR9G4Q8NGQ1 327 aa12.77□□□□□ -0.36
SYNE3-203ENST00000554873 PLEKHA3Q9HB20 300 aa12.77□□□□□ -0.36
SYNE3-203ENST00000554873 A1L4Q6 167 aa12.77□□□□□ -0.37
SYNE3-203ENST00000554873 C12orf77C9JDV5 145 aa12.77□□□□□ -0.37
SYNE3-203ENST00000554873 CER1O95813 267 aa12.77□□□□□ -0.37
SYNE3-203ENST00000554873 PLGLB1Q02325 96 aa12.77□□□□□ -0.37
SYNE3-203ENST00000554873 GUSBP1Q15486 140 aa12.77□□□□□ -0.37
SYNE3-203ENST00000554873 TEPPQ6URK8 271 aa12.77□□□□□ -0.37
SYNE3-203ENST00000554873 LINC00696Q6ZRV3 163 aa12.77□□□□□ -0.37
SYNE3-203ENST00000554873 GALMQ96C23 342 aa12.77□□□□□ -0.37
SYNE3-203ENST00000554873 SPANXB1Q9NS25 103 aaPredicted RBP12.77□□□□□ -0.37
SYNE3-203ENST00000554873 SIVA1O15304 175 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 TSPAN13O95857 204 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 GRPP07492 148 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 HBBP68871 147 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 ASPHD1Q5U4P2 390 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms