RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 P2RY1P47900 373 aa9.05□□□□□ -0.96
RDH11-207ENST00000554731 AKR1C2P52895 323 aa9.05□□□□□ -0.96
RDH11-207ENST00000554731 Q6ZTC4 211 aa9.05□□□□□ -0.96
RDH11-207ENST00000554731 LINC00336Q6ZUF6 198 aa9.05□□□□□ -0.96
RDH11-207ENST00000554731 NARS2Q96I59 477 aaKnown RBP9.05□□□□□ -0.96
RDH11-207ENST00000554731 PDCD10Q9BUL8 212 aa9.05□□□□□ -0.96
RDH11-207ENST00000554731 KIAA1109Q2LD37 5005 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 IGHV4-4A0A075B6R2 117 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 A0A0B4J293 547 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 KNCNA6PVL3 124 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 ZNF705EA8MWA4 302 aaPredicted RBP9.04□□□□□ -0.96
RDH11-207ENST00000554731 CLN5O75503 358 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 ATG12O94817 140 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 IGKV1-5P01602 117 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 ZNF688P0C7X2 276 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 RNASE2P10153 161 aaKnown RBP9.04□□□□□ -0.96
RDH11-207ENST00000554731 PGAM2P15259 253 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 C4BPBP20851 252 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 CRYBB3P26998 211 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 HOXA1P49639 335 aaPredicted RBP9.04□□□□□ -0.96
RDH11-207ENST00000554731 RND3P61587 244 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 LSM3P62310 102 aaKnown RBP9.04□□□□□ -0.96
RDH11-207ENST00000554731 KCTD21Q4G0X4 260 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 PVRIGQ6DKI7 326 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 SNX29P2Q8IUI4 249 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 TMEM230Q96A57 120 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 RNF126Q9BV68 326 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 ENY2Q9NPA8 101 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 X6R8D5 127 aa9.04□□□□□ -0.96
RDH11-207ENST00000554731 ELOA3CA0A087WX78 387 aaPredicted RBP9.03□□□□□ -0.96
RDH11-207ENST00000554731 APOA1P02647 267 aa9.03□□□□□ -0.96
RDH11-207ENST00000554731 P0C879 139 aa9.03□□□□□ -0.96
RDH11-207ENST00000554731 OPRK1P41145 380 aa9.03□□□□□ -0.96
RDH11-207ENST00000554731 ETV6P41212 452 aa9.03□□□□□ -0.96
RDH11-207ENST00000554731 EIF2B2P49770 351 aaKnown RBP9.03□□□□□ -0.96
RDH11-207ENST00000554731 PPP5CP53041 499 aa9.03□□□□□ -0.96
RDH11-207ENST00000554731 ACTL10Q5JWF8 245 aa9.03□□□□□ -0.96
RDH11-207ENST00000554731 OR4X1Q8NH49 305 aa9.03□□□□□ -0.96
RDH11-207ENST00000554731 DCANP1Q8TF63 244 aa9.03□□□□□ -0.96
RDH11-207ENST00000554731 ZNF486Q96H40 463 aaPredicted RBP9.03□□□□□ -0.96
RDH11-207ENST00000554731 FNDC4Q9H6D8 234 aaPredicted RBP9.03□□□□□ -0.96
RDH11-207ENST00000554731 MRPL36Q9P0J6 103 aaKnown RBP9.03□□□□□ -0.96
RDH11-207ENST00000554731 COMMD3Q9UBI1 195 aa9.03□□□□□ -0.96
RDH11-207ENST00000554731 TBC1D24Q9ULP9 559 aa9.03□□□□□ -0.96
RDH11-207ENST00000554731 M0QYG6 137 aa9.02□□□□□ -0.97
RDH11-207ENST00000554731 PI3P19957 117 aa9.02□□□□□ -0.97
RDH11-207ENST00000554731 RPL5P46777 297 aaKnown RBP9.02□□□□□ -0.97
RDH11-207ENST00000554731 PIGPP57054 158 aa9.02□□□□□ -0.97
RDH11-207ENST00000554731 TP53RKQ96S44 253 aa9.02□□□□□ -0.97
RDH11-207ENST00000554731 CLEC5AQ9NY25 188 aa9.02□□□□□ -0.97
RDH11-207ENST00000554731 TRAV30A0A087WSZ9 112 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 HELTA6NFD8 242 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 IGKV1-17P01599 117 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 AMBPP02760 352 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 DHRS2Q13268 280 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 MLANAQ16655 118 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 TRIM16LQ309B1 348 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 TIGITQ495A1 244 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 CSNK1G2-AS1Q8NCQ2 148 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 RNASE11Q8TAA1 199 aaKnown RBP9.01□□□□□ -0.97
RDH11-207ENST00000554731 YIPF6Q96EC8 236 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 RRNAD1Q96FB5 475 aaKnown RBP9.01□□□□□ -0.97
RDH11-207ENST00000554731 VCX3AQ9NNX9 186 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 PCLOQ9Y6V0 5065 aa9.01□□□□□ -0.97
RDH11-207ENST00000554731 DEFB131BA0A096LNP1 70 aa9□□□□□ -0.97
RDH11-207ENST00000554731 C3orf85A0A1B0GTC6 90 aa9□□□□□ -0.97
RDH11-207ENST00000554731 RPS10-NUDT3A0A1W2PQS6 291 aa9□□□□□ -0.97
RDH11-207ENST00000554731 AP2S1P53680 142 aaPredicted RBP9□□□□□ -0.97
RDH11-207ENST00000554731 NUTF2P61970 127 aaKnown RBP9□□□□□ -0.97
RDH11-207ENST00000554731 BSXQ3C1V8 233 aa9□□□□□ -0.97
RDH11-207ENST00000554731 RNASE10Q5GAN6 216 aaKnown RBP9□□□□□ -0.97
RDH11-207ENST00000554731 PSMG4Q5JS54 123 aa9□□□□□ -0.97
RDH11-207ENST00000554731 RAB40CQ96S21 281 aa9□□□□□ -0.97
RDH11-207ENST00000554731 C1QTNF4Q9BXJ3 329 aa9□□□□□ -0.97
RDH11-207ENST00000554731 COPZ2Q9P299 210 aa9□□□□□ -0.97
RDH11-207ENST00000554731 CELA1Q9UNI1 258 aa9□□□□□ -0.97
RDH11-207ENST00000554731 U3KQE9 123 aa9□□□□□ -0.97
RDH11-207ENST00000554731 HNRNPCP07910 306 aaKnown RBP eCLIP8.99□□□□□ -0.97
RDH11-207ENST00000554731 P0DMU3 169 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 FAM231AP0DMU4 169 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 FAM231CP0DMU5 169 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 ELK1P19419 428 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 SNRPD3P62318 126 aaKnown RBP8.99□□□□□ -0.97
RDH11-207ENST00000554731 C12orf74Q32Q52 190 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 SP6Q3SY56 376 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 RNASE12Q5GAN4 147 aaKnown RBP8.99□□□□□ -0.97
RDH11-207ENST00000554731 C16orf54Q6UWD8 224 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 ZNF767PQ75MW2 155 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 LHFPL1Q86WI0 220 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 ARRDC1Q8N5I2 433 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 POM121L12Q8N7R1 296 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 CCDC71LQ8N9Z2 235 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 OR1S2Q8NGQ3 325 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 ZFAND1Q8TCF1 268 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 Q8WTZ3 238 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 GLMPQ8WWB7 406 aa8.99□□□□□ -0.97
RDH11-207ENST00000554731 A0A0G2JRQ6 117 aa8.98□□□□□ -0.97
RDH11-207ENST00000554731 A0A1B0GVY2 172 aa8.98□□□□□ -0.97
RDH11-207ENST00000554731 HPGDSO60760 199 aa8.98□□□□□ -0.97
RDH11-207ENST00000554731 B3GALNT1O75752 331 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms