RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 LYZL2Q7Z4W2 148 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 OR52E5Q8NH55 327 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 OR1S1Q8NH92 325 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 SLC25A21Q9BQT8 299 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-213ENST00000554600 HIPK2Q9H2X6 1198 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 SRD5A3Q9H8P0 318 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 SHPKQ9UHJ6 478 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 IGHV3OR16-13A0A075B7E8 117 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 IGHV3-74A0A0B4J1X5 117 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 TRAV25A0A0B4J276 109 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 PIGBOS1A0A0B4J2F0 54 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 RPS10-NUDT3A0A1W2PQS6 291 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 A6NHS1 94 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 C15orf62A8K5M9 175 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 A8MZ25 164 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 K7EMT4 169 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 SCGB2A1O75556 95 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 CCR6P51684 374 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 SMCO1Q147U7 214 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 HAGHQ16775 308 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 LINC00299Q6ZSB3 139 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 CENPSQ8N2Z9 138 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 TMEM116Q8NCL8 245 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 SLC24A4Q8NFF2 622 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 GINS3Q9BRX5 216 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 AGRNO00468 2067 aa8.01□□□□□ -1.13
SHMT2-213ENST00000554600 IGKV3-7A0A075B6H7 116 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 IGHV7-4-1A0A0J9YVY3 117 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 NAP1L6A6NFF2 107 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 CENPXA8MT69 81 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 TMEM50AO95807 157 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 IFNA10P01566 189 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 NPY1RP25929 384 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 TNFRSF9Q07011 255 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 PPP1R1AQ13522 171 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 RBMS2Q15434 407 aaKnown RBP8□□□□□ -1.13
SHMT2-213ENST00000554600 BAK1Q16611 211 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 MLANAQ16655 118 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 AARDQ4LEZ3 155 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 ZNF600Q6ZNG1 722 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 NOXA1Q86UR1 476 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 SPATA25Q9BR10 227 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 RHPN1-AS1Q9BWJ2 59 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 RBKSQ9H477 322 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 FNDC4Q9H6D8 234 aaPredicted RBP8□□□□□ -1.13
SHMT2-213ENST00000554600 CACFD1Q9UGQ2 172 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 UBQLN2Q9UHD9 624 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 SMPXQ9UHP9 88 aa8□□□□□ -1.13
SHMT2-213ENST00000554600 PUS1Q9Y606 427 aaKnown RBP eCLIP8□□□□□ -1.13
SHMT2-213ENST00000554600 TRAV14DV4A0A0A6YYC5 116 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 A0A1B0GU03 582 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 OR4C46A6NHA9 309 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 CLN5O75503 358 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 BMI1P35226 326 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 TFPI2P48307 235 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 RND2P52198 227 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 CNPY1Q3B7I2 92 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 BSXQ3C1V8 233 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 C2orf83Q53S99 150 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 NMSQ5H8A3 153 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 TOMM20LQ6UXN7 152 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 DTD1Q8TEA8 209 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 SDHCQ99643 169 aaPredicted RBP7.99□□□□□ -1.13
SHMT2-213ENST00000554600 SPAG8Q99932 426 aaPredicted RBP7.99□□□□□ -1.13
SHMT2-213ENST00000554600 TM2D3Q9BRN9 247 aa7.99□□□□□ -1.13
SHMT2-213ENST00000554600 MRPL36Q9P0J6 103 aaKnown RBP7.99□□□□□ -1.13
SHMT2-213ENST00000554600 PAIP2BQ9ULR5 123 aaKnown RBP7.99□□□□□ -1.13
SHMT2-213ENST00000554600 IGHV3-66A0A0C4DH42 116 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 DUXBA0A1W2PPF3 345 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 CHEK1O14757 476 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 TSPAN4O14817 238 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 SFT2D2O95562 160 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 IFNA4P05014 189 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 HOXB5P09067 269 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 IL7P13232 177 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 RPL11P62913 178 aaKnown RBP7.98□□□□□ -1.13
SHMT2-213ENST00000554600 TIGITQ495A1 244 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 PVRIGQ6DKI7 326 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 ETFRF1Q6IPR1 90 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 OR4X1Q8NH49 305 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 RNASEH2CQ8TDP1 164 aaKnown RBP7.98□□□□□ -1.13
SHMT2-213ENST00000554600 S100ZQ8WXG8 99 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 ACY3Q96HD9 319 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 RNF2Q99496 336 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 RETNQ9HD89 108 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 HSPB7Q9UBY9 170 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 FLVCR2Q9UPI3 526 aa7.98□□□□□ -1.13
SHMT2-213ENST00000554600 TRAV30A0A087WSZ9 112 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 RBMY1BA6NDE4 496 aaKnown RBP7.97□□□□□ -1.13
SHMT2-213ENST00000554600 RBMY1EA6NEQ0 496 aaKnown RBP7.97□□□□□ -1.13
SHMT2-213ENST00000554600 NDUFB6O95139 128 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 RBMY1DP0C7P1 496 aaKnown RBP7.97□□□□□ -1.13
SHMT2-213ENST00000554600 IAPPP10997 89 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 SLC25A4P12235 298 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 NPPCP23582 126 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 UBE2MP61081 183 aaKnown RBP7.97□□□□□ -1.13
SHMT2-213ENST00000554600 TCF24Q7RTU0 167 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 GBGT1Q8N5D6 347 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 ST8SIA2Q92186 375 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 NARS2Q96I59 477 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms