RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 HLA-DMAP28067 261 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 FCGR2BP31994 310 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-228ENST00000554592 CMC4P56277 68 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-228ENST00000554592 ASAH1Q13510 395 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 SPHARQ15513 63 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 PRSS8Q16651 343 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 C15orf32Q32M92 178 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 SOHLH1Q5JUK2 328 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 HACD4Q5VWC8 232 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 RPL22L1Q6P5R6 122 aaKnown RBP3.51□□□□□ -1.85
ATXN3-228ENST00000554592 ZNF880Q6PDB4 577 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 TMPRSS11AQ6ZMR5 421 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 SLC25A42Q86VD7 318 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 ZNF645Q8N7E2 425 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 OR52I1Q8NGK6 324 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 OR11H2Q8NH07 326 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 SRSF12Q8WXF0 261 aaKnown RBP3.51□□□□□ -1.85
ATXN3-228ENST00000554592 UFD1Q92890 307 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 ZNF486Q96H40 463 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-228ENST00000554592 NEDD4LQ96PU5 975 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 SPIN2AQ99865 258 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 SPIN2BQ9BPZ2 258 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 BANF2Q9H503 90 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 SLC35D1Q9NTN3 355 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 NDUFB11Q9NX14 153 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 UBQLN2Q9UHD9 624 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 SSR3Q9UNL2 185 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 DNAH17Q9UFH2 4485 aa3.51□□□□□ -1.85
ATXN3-228ENST00000554592 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 LOC100506127A0A0U1RQW1 187 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 OR4C46A6NHA9 309 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 CENPXA8MT69 81 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 E5RGE8 158 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 M0R1X1 148 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 NAPSAO96009 420 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 HLA-DQB1P01920 261 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 GSTT2P0CG29 244 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 GSTT2BP0CG30 244 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 RRASP10301 218 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 IGFBP3P17936 291 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-228ENST00000554592 PSMB6P28072 239 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 FGF9P31371 208 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-228ENST00000554592 SDC2P34741 201 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 UBE2KP61086 200 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 LSM3P62310 102 aaKnown RBP3.5□□□□□ -1.85
ATXN3-228ENST00000554592 TPBGQ13641 420 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 TRAM1Q15629 374 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 TNXAQ16473 311 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 MRGPRG-AS1Q2M3A8 158 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 VMA21Q3ZAQ7 101 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 ZNF876PQ49A33 203 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 CCDC58Q4VC31 144 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 HSD17B12Q53GQ0 312 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 PVRIGQ6DKI7 326 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 CLEC19AQ6UXS0 136 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 GSG1LQ6UXU4 331 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 MOB1BQ7L9L4 216 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 FAM89BQ8N5H3 189 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 JAGN1Q8N5M9 183 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-228ENST00000554592 OR5AP2Q8NGF4 316 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 OR13C5Q8NGS8 318 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 OR6F1Q8NGZ6 308 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 OR5B3Q8NH48 314 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 ACOT12Q8WYK0 555 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 SLC25A46Q96AG3 418 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 FAAP24Q9BTP7 215 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 RNF126Q9BV68 326 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 SLC5A7Q9GZV3 580 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 SCRT2Q9NQ03 307 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 CKLFQ9UBR5 152 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 GHRLQ9UBU3 117 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 MGAT4AQ9UM21 535 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 ZNF257Q9Y2Q1 563 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 NSG2Q9Y328 171 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 LSM2Q9Y333 95 aaKnown RBP3.5□□□□□ -1.85
ATXN3-228ENST00000554592 UFC1Q9Y3C8 167 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 HERC1Q15751 4861 aa3.5□□□□□ -1.85
ATXN3-228ENST00000554592 HSPG2P98160 4391 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 TRBV6-6A0A0A6YYG2 114 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 TRBV7-1A0A0A6YYK4 115 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 TRDV1A0A1B0GX56 115 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 C16orf90A8MZG2 172 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 DEFB4AO15263 64 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 CREBL2O60519 120 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-228ENST00000554592 DHFRP00374 187 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 IFNA10P01566 189 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 CFC1BP0CG36 223 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 CFC1P0CG37 223 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 HIST1H1BP16401 226 aaKnown RBP3.49□□□□□ -1.85
ATXN3-228ENST00000554592 MYL9P24844 172 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 HLA-DMBP28068 263 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 ETV1P50549 477 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 TMEM187Q14656 261 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 CDK10Q15131 360 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 SSX1Q16384 188 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 RTL8BQ17RB0 113 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 KLK9Q2XQG4 91 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 ZFP69Q49AA0 526 aa3.49□□□□□ -1.85
ATXN3-228ENST00000554592 OR2G6Q5TZ20 316 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms