RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 KIAA1644Q3SXP7 199 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 LRRC10Q5BKY1 277 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 DNLZQ5SXM8 178 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 OR5AU1Q8NGC0 362 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 ZNF430Q9H8G1 570 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 CTSZQ9UBR2 303 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 V9GYV3 84 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 MUC6Q6W4X9 2439 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 ZNF705FA8MVS1 300 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 C9JCJ5 164 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 CA1P00915 261 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 ZNF705DP0CH99 300 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 ZNF705BP0CI00 300 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 LGALS4P56470 323 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 TIGITQ495A1 244 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 FNDC4Q9H6D8 234 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 C8orf88P0DMB2 117 aa12.69□□□□□ -0.38
ARHGEF40-203ENST00000554514 CRISP2P16562 243 aa12.69□□□□□ -0.38
ARHGEF40-203ENST00000554514 HCP5Q6MZN7 132 aa12.69□□□□□ -0.38
ARHGEF40-203ENST00000554514 BAGE3Q86Y29 109 aa12.69□□□□□ -0.38
ARHGEF40-203ENST00000554514 BAGE2Q86Y30 109 aa12.69□□□□□ -0.38
ARHGEF40-203ENST00000554514 SLC25A33Q9BSK2 321 aa12.69□□□□□ -0.38
ARHGEF40-203ENST00000554514 COX7A2P2O60397 106 aa12.69□□□□□ -0.38
ARHGEF40-203ENST00000554514 OR5G3P0C626 314 aa12.69□□□□□ -0.38
ARHGEF40-203ENST00000554514 MEF2CQ06413 473 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF40-203ENST00000554514 OR5AN1Q8NGI8 311 aa12.69□□□□□ -0.38
ARHGEF40-203ENST00000554514 OR4C13Q8NGP0 309 aa12.69□□□□□ -0.38
ARHGEF40-203ENST00000554514 FNDC10F2Z333 226 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 LYNX1G3V0Z9 82 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 SERF1AO75920 110 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 LYNX1P0DP58 116 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 IQCJQ1A5X6 159 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 MRPL54Q6P161 138 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 ST6GALNAC3Q8NDV1 305 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 SLC25A2Q9BXI2 301 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 MRPL36Q9P0J6 103 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 TRAV34A0A0B4J273 112 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 A8MWP6 167 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 YPEL3P61236 119 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 TGIF2LXQ8IUE1 241 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 SGK494Q96LW2 274 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 TP53TG3Q9ULZ0 132 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 CGB1A6NKQ9 187 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 MOSP00540 346 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 USF1P22415 310 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 MISP3Q96FF7 219 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 SSBP3Q9BWW4 388 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 DNAJC4Q9NNZ3 241 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 ZNF355PQ9NSJ1 428 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 NAT8BQ9UHF3 227 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 RPH3ALQ9UNE2 315 aa12.68□□□□□ -0.38
ARHGEF40-203ENST00000554514 SPTA1P02549 2419 aa12.67□□□□□ -0.38
ARHGEF40-203ENST00000554514 TDGF1P3P51864 188 aa12.67□□□□□ -0.38
ARHGEF40-203ENST00000554514 TMEM30BQ3MIR4 351 aa12.67□□□□□ -0.38
ARHGEF40-203ENST00000554514 TMEM177Q53S58 311 aa12.67□□□□□ -0.38
ARHGEF40-203ENST00000554514 FAM103A1Q9BTL3 118 aaKnown RBP12.67□□□□□ -0.38
ARHGEF40-203ENST00000554514 RUSC1-AS1Q66K80 236 aa12.67□□□□□ -0.38
ARHGEF40-203ENST00000554514 RNASE6Q93091 150 aaKnown RBP12.67□□□□□ -0.38
ARHGEF40-203ENST00000554514 WASHC3Q9Y3C0 194 aa12.67□□□□□ -0.38
ARHGEF40-203ENST00000554514 TLN1Q9Y490 2541 aaKnown RBP12.67□□□□□ -0.38
ARHGEF40-203ENST00000554514 NBASA2RRP1 2371 aa12.67□□□□□ -0.38
ARHGEF40-203ENST00000554514 ORM2P19652 201 aa12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 LOXP28300 417 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 C10orf113Q5VZT2 155 aa12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 PRR27Q6MZM9 219 aa12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 Q8NA96 180 aa12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 NAGKQ9UJ70 344 aa12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 LRBAP50851 2863 aa12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 CNTFRP26992 372 aa12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 PRR31Q5SQ13 230 aa12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 IBA57Q5T440 356 aaKnown RBP12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 BLNKQ8WV28 456 aa12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 FAM167A-AS1Q96KT0 104 aa12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 SAMD10Q9BYL1 202 aa12.66□□□□□ -0.38
ARHGEF40-203ENST00000554514 A0A1W2PN81 502 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 COTL1Q14019 142 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 PRSS33Q8NF86 280 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 TMEM167AQ8TBQ9 72 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 PAXXQ9BUH6 204 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 A0A1W2PPI3 338 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 E7EQL1 145 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 IGLV2-23P01705 113 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 TMEM11P17152 192 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 LINC00310P59036 64 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 TOMM20LQ6UXN7 152 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 PDPNQ86YL7 162 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 TBX15Q96SF7 602 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 HSPB9Q9BQS6 159 aa12.65□□□□□ -0.38
ARHGEF40-203ENST00000554514 MALRD1Q5VYJ5 2156 aa12.65□□□□□ -0.39
ARHGEF40-203ENST00000554514 H3BTX0 84 aa12.65□□□□□ -0.39
ARHGEF40-203ENST00000554514 GNG5P63218 68 aa12.65□□□□□ -0.39
ARHGEF40-203ENST00000554514 TNXAQ16473 311 aa12.65□□□□□ -0.39
ARHGEF40-203ENST00000554514 OR1B1Q8NGR6 318 aa12.65□□□□□ -0.39
ARHGEF40-203ENST00000554514 VSTM2AQ8TAG5 236 aa12.65□□□□□ -0.39
ARHGEF40-203ENST00000554514 TMEM186Q96B77 213 aa12.65□□□□□ -0.39
ARHGEF40-203ENST00000554514 NOL4LQ96MY1 436 aaPredicted RBP12.65□□□□□ -0.39
ARHGEF40-203ENST00000554514 CBLN4Q9NTU7 201 aa12.65□□□□□ -0.39
ARHGEF40-203ENST00000554514 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.39
ARHGEF40-203ENST00000554514 POLR3KQ9Y2Y1 108 aaPredicted RBP12.65□□□□□ -0.39
ARHGEF40-203ENST00000554514 LY96Q9Y6Y9 160 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms