RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 OR4C16Q8NGL9 310 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 TEX37Q96LM6 180 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 TTTY13Q9BZ97 58 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 YIPF3Q9GZM5 350 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 MARCOQ9UEW3 520 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-211ENST00000554437 HIGD1AQ9Y241 93 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 U3KQ87 197 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 DOCK5Q9H7D0 1870 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 CHD5Q8TDI0 1954 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 MED23Q9ULK4 1368 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 KIF1BO60333 1816 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 MYH3P11055 1940 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 CD109Q6YHK3 1445 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 IRGMA1A4Y4 181 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 CCDC160A6NGH7 325 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 H3BQ85 93 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 GABARAPH6UMI1 98 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 TXNDC9O14530 226 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 NPYP01303 97 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 SCTP09683 121 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 FKBP2P26885 142 aaKnown RBP2.69□□□□□ -1.98
SCFD1-211ENST00000554437 HLA-DMBP28068 263 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 SRP14P37108 136 aaKnown RBP2.69□□□□□ -1.98
SCFD1-211ENST00000554437 INSL3P51460 131 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 DNAJB13P59910 316 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 EIF5AP63241 154 aaKnown RBP2.69□□□□□ -1.98
SCFD1-211ENST00000554437 EIF3IQ13347 325 aaKnown RBP2.69□□□□□ -1.98
SCFD1-211ENST00000554437 WHAMMP3Q1A5X7 153 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 C1orf140Q5VVS0 124 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 SDIM1Q6ZPB5 146 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 PRR15Q8IV56 129 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 IFT20Q8IY31 132 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 TCTE3Q8IZS6 198 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 C10orf126Q8N4M7 172 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 TSTD1Q8NFU3 115 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 PPTC7Q8NI37 304 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 C2orf88Q9BSF0 95 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 TMEM133Q9H2Q1 129 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 SMDT1Q9H4I9 107 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 LOXHD1Q8IVV2 1947 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 DOCK3Q8IZD9 2030 aa2.69□□□□□ -1.98
SCFD1-211ENST00000554437 DICER1Q9UPY3 1922 aaKnown RBP2.68□□□□□ -1.98
SCFD1-211ENST00000554437 A0A096LPI6 279 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 IGHV3-73A0A0B4J1V6 119 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 TRAV5A0A0B4J249 113 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 C19orf71A6NCJ1 209 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 RPL36A-HNRNPH2H7BZ11 118 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 M0R378 163 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 OR2T1O43869 369 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 GGCTO75223 188 aaKnown RBP2.68□□□□□ -1.98
SCFD1-211ENST00000554437 CDS2O95674 445 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 OR2H2O95918 312 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 IGHV3-53P01767 116 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 HTR1AP08908 422 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 SLC38A11Q08AI6 406 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 KRTAP13-2Q52LG2 175 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 LINC01554Q52M75 96 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 DNLZQ5SXM8 178 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 KPRPQ5T749 579 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-211ENST00000554437 ZNF705AQ6ZN79 300 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-211ENST00000554437 LHFPL1Q86WI0 220 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 BPIFA4PQ86YQ2 179 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 RPP25LQ8N5L8 163 aaKnown RBP2.68□□□□□ -1.98
SCFD1-211ENST00000554437 ST20-AS1Q8NBB2 130 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 APCDD1LQ8NCL9 501 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 OR52R1Q8NGF1 315 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 OR8D4Q8NGM9 314 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 CLDND2Q8NHS1 167 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 STAG3L4Q8TBR4 150 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 DCANP1Q8TF63 244 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 BICRAQ9NZM4 1560 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 TUBGCP6Q96RT7 1819 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 OVOS2A0A0G2JMS6 1433 aa2.68□□□□□ -1.98
SCFD1-211ENST00000554437 SCN10AQ9Y5Y9 1956 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 ADAMTSL1Q8N6G6 1762 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 SMARCA2P51531 1590 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 ROCK2O75116 1388 aaKnown RBP2.67□□□□□ -1.98
SCFD1-211ENST00000554437 IGLV3-12A0A075B6K2 115 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 A0A087X0T9 212 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 A0A0D9SEW6 157 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 ARRDC5A6NEK1 342 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 F8W036 122 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 M0R2Z0 102 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 UBFD1O14562 309 aaKnown RBP2.67□□□□□ -1.98
SCFD1-211ENST00000554437 DLEU1O43261 78 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 LYZL6O75951 148 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 DPM2O94777 84 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 IGHV3-7P01780 117 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 LGALS3P17931 250 aaKnown RBP2.67□□□□□ -1.98
SCFD1-211ENST00000554437 EVI2AP22794 236 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 PSMB8P28062 276 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 HIST1H1AQ02539 215 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-211ENST00000554437 MIAQ16674 131 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 LGALSLQ3ZCW2 172 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-211ENST00000554437 OR2T10Q8NGZ9 312 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 TERB2Q8NHR7 220 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 MUC7Q8TAX7 377 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 SMCR5Q8TEV8 140 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 MIEN1Q9BRT3 115 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 SMIM3Q9BZL3 60 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms