RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 UNQ5815/PRO19632Q6UWF5 114 aa12.64□□□□□ -0.39
NEK9-204ENST00000554258 UXS1Q8NBZ7 420 aa12.64□□□□□ -0.39
NEK9-204ENST00000554258 OR4D5Q8NGN0 318 aa12.64□□□□□ -0.39
NEK9-204ENST00000554258 RNF183Q96D59 192 aa12.64□□□□□ -0.39
NEK9-204ENST00000554258 WFDC10AQ9H1F0 79 aa12.64□□□□□ -0.39
NEK9-204ENST00000554258 RBMXL2O75526 392 aaKnown RBP12.63□□□□□ -0.39
NEK9-204ENST00000554258 CTRB1P17538 263 aa12.63□□□□□ -0.39
NEK9-204ENST00000554258 WT1-ASQ06250 92 aa12.63□□□□□ -0.39
NEK9-204ENST00000554258 CTRB2Q6GPI1 263 aa12.63□□□□□ -0.39
NEK9-204ENST00000554258 Q6ZNX1 250 aa12.63□□□□□ -0.39
NEK9-204ENST00000554258 ZBTB8BQ8NAP8 495 aaPredicted RBP12.63□□□□□ -0.39
NEK9-204ENST00000554258 OR10W1Q8NGF6 305 aa12.63□□□□□ -0.39
NEK9-204ENST00000554258 ABHD5Q8WTS1 349 aa12.63□□□□□ -0.39
NEK9-204ENST00000554258 FYTTD1Q96QD9 318 aaKnown RBP12.63□□□□□ -0.39
NEK9-204ENST00000554258 A0A1W2PN81 502 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 OR11H12B2RN74 326 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 CCSO14618 274 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 IFNA17P01571 189 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 AREGP15514 252 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 PSMB6P28072 239 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 CHRNA7P36544 502 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 ECSCRQ19T08 205 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 IAH1Q2TAA2 248 aaPredicted RBP12.62□□□□□ -0.39
NEK9-204ENST00000554258 OR2C3Q8N628 320 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 OR9G4Q8NGQ1 327 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 OR1S1Q8NH92 325 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 C2orf50Q96LR7 162 aa12.62□□□□□ -0.39
NEK9-204ENST00000554258 H3BUA1 57 aa12.61□□□□□ -0.39
NEK9-204ENST00000554258 CD7P09564 240 aa12.61□□□□□ -0.39
NEK9-204ENST00000554258 OR13C7P0DN81 318 aa12.61□□□□□ -0.39
NEK9-204ENST00000554258 ATF4P18848 351 aaPredicted RBP12.61□□□□□ -0.39
NEK9-204ENST00000554258 ZP3P21754 424 aa12.61□□□□□ -0.39
NEK9-204ENST00000554258 PVRIGQ6DKI7 326 aa12.61□□□□□ -0.39
NEK9-204ENST00000554258 GSG1LQ6UXU4 331 aa12.61□□□□□ -0.39
NEK9-204ENST00000554258 IL34Q6ZMJ4 242 aa12.61□□□□□ -0.39
NEK9-204ENST00000554258 OR5T1Q8NG75 326 aa12.61□□□□□ -0.39
NEK9-204ENST00000554258 PDCD10Q9BUL8 212 aa12.61□□□□□ -0.39
NEK9-204ENST00000554258 C13orf42A0A1B0GVH6 325 aa12.6□□□□□ -0.39
NEK9-204ENST00000554258 SSNA1O43805 119 aa12.6□□□□□ -0.39
NEK9-204ENST00000554258 APELAP0DMC3 54 aa12.6□□□□□ -0.39
NEK9-204ENST00000554258 BSXQ3C1V8 233 aa12.6□□□□□ -0.39
NEK9-204ENST00000554258 ZNF114Q8NC26 417 aa12.6□□□□□ -0.39
NEK9-204ENST00000554258 FANCD2OSQ96PS1 177 aa12.6□□□□□ -0.39
NEK9-204ENST00000554258 HINT2Q9BX68 163 aa12.6□□□□□ -0.39
NEK9-204ENST00000554258 RBKSQ9H477 322 aa12.6□□□□□ -0.39
NEK9-204ENST00000554258 SRRM2Q9UQ35 2752 aaKnown RBP12.59□□□□□ -0.39
NEK9-204ENST00000554258 TRBV9A0A0B4J1U6 114 aa12.59□□□□□ -0.39
NEK9-204ENST00000554258 C5orf51A6NDU8 294 aa12.59□□□□□ -0.39
NEK9-204ENST00000554258 NKX2-1P43699 371 aaPredicted RBP12.59□□□□□ -0.39
NEK9-204ENST00000554258 H2BFSP57053 126 aa12.59□□□□□ -0.39
NEK9-204ENST00000554258 ERHP84090 104 aaKnown RBP12.59□□□□□ -0.39
NEK9-204ENST00000554258 TMEM217Q8N7C4 229 aa12.59□□□□□ -0.39
NEK9-204ENST00000554258 APOBP04114 4563 aaKnown RBP12.59□□□□□ -0.39
NEK9-204ENST00000554258 GOSR2O14653 212 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 SYNGR2O43760 224 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 MED6O75586 246 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 SIX6O95475 246 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 RRAS2P62070 204 aaPredicted RBP12.58□□□□□ -0.4
NEK9-204ENST00000554258 RBMY1FQ15415 496 aaKnown RBP12.58□□□□□ -0.4
NEK9-204ENST00000554258 FCN2Q15485 313 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 SPINK9Q5DT21 86 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 WFDC3Q8IUB2 231 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 GGTLC1Q9BX51 225 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 NMES1Q9C002 83 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 MED28Q9H204 178 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 SLA2Q9H6Q3 261 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 GSKIPQ9P0R6 139 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 MGAT4CQ9UBM8 478 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 DMRT1Q9Y5R6 373 aa12.58□□□□□ -0.4
NEK9-204ENST00000554258 F11RQ9Y624 299 aaKnown RBP12.58□□□□□ -0.4
NEK9-204ENST00000554258 IGLV11-55A0A075B6I3 123 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 CEBPZOSA8MTT3 80 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 FAM25EA8MYX2 175 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 RTL8CO15255 209 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 CDK2AP2O75956 126 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 MBPP02686 304 aaPredicted RBP12.57□□□□□ -0.4
NEK9-204ENST00000554258 REG1AP05451 166 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 RNASE2P10153 161 aaKnown RBP12.57□□□□□ -0.4
NEK9-204ENST00000554258 CXCL3P19876 107 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 BMI1P35226 326 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 MFAP2P55001 183 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 SYNJ2BPP57105 145 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 CYCSP99999 105 aaKnown RBP12.57□□□□□ -0.4
NEK9-204ENST00000554258 KLF5Q13887 457 aaPredicted RBP12.57□□□□□ -0.4
NEK9-204ENST00000554258 C19orf35Q6ZS72 473 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 Q8N1X5 172 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 OR11H7Q8NGC8 314 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 OR1L6Q8NGR2 347 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 OR1P1Q8NH06 330 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 DTD1Q8TEA8 209 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 C11orf1Q9H5F2 150 aa12.57□□□□□ -0.4
NEK9-204ENST00000554258 RANGRFQ9HD47 186 aaPredicted RBP12.57□□□□□ -0.4
NEK9-204ENST00000554258 NXPH3O95157 252 aa12.56□□□□□ -0.4
NEK9-204ENST00000554258 CSN3P07498 182 aa12.56□□□□□ -0.4
NEK9-204ENST00000554258 HIST1H1BP16401 226 aaKnown RBP12.56□□□□□ -0.4
NEK9-204ENST00000554258 HOXA1P49639 335 aaPredicted RBP12.56□□□□□ -0.4
NEK9-204ENST00000554258 ATP5IP56385 69 aaPredicted RBP12.56□□□□□ -0.4
NEK9-204ENST00000554258 TPPP2P59282 170 aa12.56□□□□□ -0.4
NEK9-204ENST00000554258 POLR2GP62487 172 aaKnown RBP eCLIP12.56□□□□□ -0.4
NEK9-204ENST00000554258 OR2K2Q8NGT1 345 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms