RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 GPX4P36969 197 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-209ENST00000553949 CAV2P51636 162 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 MFAP4P55083 255 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 RAP2BP61225 183 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 CD69Q07108 199 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 ETFRF1Q6IPR1 90 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 UBAC2Q8NBM4 344 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 OR11H1Q8NG94 326 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 DUX3Q96PT4 197 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 RNF126Q9BV68 326 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 RANGRFQ9HD47 186 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-209ENST00000553949 LYRM2Q9NU23 88 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-209ENST00000553949 hCG_2014768A0A024R1R8 64 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 TRAV14DV4A0A0A6YYC5 116 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 FAM24AA6NFZ4 105 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 PMS2P5A8MQ11 134 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 PRSS46E5RG02 174 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 PPP5D1E7EU14 171 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 TSPAN15O95858 294 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 METTL15P1P0C7V9 234 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 SLC25A4P12235 298 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 FCGR2BP31994 310 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-209ENST00000553949 GPR183P32249 361 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 MYCNOSP40205 109 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 P2RY1P47900 373 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 ZNF616Q08AN1 781 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 FHL3Q13643 280 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 Q56UQ5 140 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 ACSM6Q6P461 480 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 PRSS54Q6PEW0 395 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 SLC16A13Q7RTY0 426 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 CACNG8Q8WXS5 425 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 DPF1Q92782 380 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 ATP6V0BQ99437 205 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 TXN2Q99757 166 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 MRPL36Q9P0J6 103 aaKnown RBP9.43□□□□□ -0.9
SHMT2-209ENST00000553949 MBD2Q9UBB5 411 aa9.43□□□□□ -0.9
SHMT2-209ENST00000553949 A0A1B0GVG6 124 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 IGSF23A1L1A6 192 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 OR2T8A6NH00 312 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 LINC01619G3V211 115 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 BMPR1BO00238 502 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 CCNKO75909 580 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 ARL3P36405 182 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 NPBWR1P48145 328 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 FGL1Q08830 312 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 Q5BKY6 102 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 OR8G2PQ6IF36 304 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 HAPLN4Q86UW8 402 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 TMEM252Q8N6L7 170 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 OR10P1Q8NGE3 313 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 OR2T35Q8NGX2 323 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 OR4X1Q8NH49 305 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 THAP6Q8TBB0 222 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 BSCL2Q96G97 398 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-209ENST00000553949 ZC4H2Q9NQZ6 224 aa9.42□□□□□ -0.9
SHMT2-209ENST00000553949 GAR1Q9NY12 217 aaKnown RBP9.42□□□□□ -0.9
SHMT2-209ENST00000553949 TGOLN2O43493 480 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 GNG7O60262 68 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 GGCTO75223 188 aaKnown RBP9.41□□□□□ -0.9
SHMT2-209ENST00000553949 CLN5O75503 358 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 CST7O76096 145 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 PF4P02776 101 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 LYL1P12980 280 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 ZP3P21754 424 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 HOXD3P31249 432 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-209ENST00000553949 SULT1A1P50225 295 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 RND2P52198 227 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 ARL16Q0P5N6 197 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 GAMTQ14353 236 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 SPSB3Q6PJ21 355 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 ACOT7LQ6ZUV0 252 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 STX12Q86Y82 276 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 TMEM116Q8NCL8 245 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 DCUN1D4Q92564 292 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 ACY3Q96HD9 319 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 SLC35E1Q96K37 410 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 SLC25A31Q9H0C2 315 aa9.41□□□□□ -0.9
SHMT2-209ENST00000553949 G3V3Q6 166 aa9.4□□□□□ -0.9
SHMT2-209ENST00000553949 SCAF4O95104 1147 aaKnown RBP9.4□□□□□ -0.9
SHMT2-209ENST00000553949 OR2C1O95371 312 aa9.4□□□□□ -0.9
SHMT2-209ENST00000553949 CTSGP08311 255 aa9.4□□□□□ -0.9
SHMT2-209ENST00000553949 ADMP35318 185 aa9.4□□□□□ -0.9
SHMT2-209ENST00000553949 SLURP1P55000 103 aa9.4□□□□□ -0.9
SHMT2-209ENST00000553949 EWSR1Q01844 656 aaKnown RBP eCLIP9.4□□□□□ -0.9
SHMT2-209ENST00000553949 RPEL1Q2QD12 228 aa9.4□□□□□ -0.9
SHMT2-209ENST00000553949 TMEM217Q8N7C4 229 aa9.4□□□□□ -0.9
SHMT2-209ENST00000553949 NPIPB3Q92617 1050 aa9.4□□□□□ -0.9
SHMT2-209ENST00000553949 CHRDL1Q9BU40 450 aa9.4□□□□□ -0.9
SHMT2-209ENST00000553949 TRRAPQ9Y4A5 3859 aa9.4□□□□□ -0.91
SHMT2-209ENST00000553949 TRAV30A0A087WSZ9 112 aa9.39□□□□□ -0.91
SHMT2-209ENST00000553949 SMLR1H3BR10 107 aa9.39□□□□□ -0.91
SHMT2-209ENST00000553949 NUPL2O15504 423 aaKnown RBP9.39□□□□□ -0.91
SHMT2-209ENST00000553949 DLK1P80370 383 aa9.39□□□□□ -0.91
SHMT2-209ENST00000553949 BAXQ07812 192 aa9.39□□□□□ -0.91
SHMT2-209ENST00000553949 KLF5Q13887 457 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-209ENST00000553949 LINC00482Q8N8I6 264 aa9.39□□□□□ -0.91
SHMT2-209ENST00000553949 GGACTQ9BVM4 153 aa9.39□□□□□ -0.91
SHMT2-209ENST00000553949 IGHV3-35A0A0C4DH35 117 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 SMCO3A2RU48 225 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms