RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 UBE2L3P68036 154 aaKnown RBP11.79□□□□□ -0.52
ACTN1-211ENST00000553882 MEF2CQ06413 473 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-211ENST00000553882 C21orf62-AS1Q17RA5 79 aa11.79□□□□□ -0.52
ACTN1-211ENST00000553882 TMEM30BQ3MIR4 351 aa11.79□□□□□ -0.52
ACTN1-211ENST00000553882 TIGITQ495A1 244 aa11.79□□□□□ -0.52
ACTN1-211ENST00000553882 OR4C13Q8NGP0 309 aa11.79□□□□□ -0.52
ACTN1-211ENST00000553882 FNDC4Q9H6D8 234 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-211ENST00000553882 ABCA4P78363 2273 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 SERF1AO75920 110 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 PLAUP00749 431 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 LINC00310P59036 64 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 USF2Q15853 346 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-211ENST00000553882 OR5AU1Q8NGC0 362 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 NPIPB3Q92617 1050 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 RITA1Q96K30 269 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 ZNF430Q9H8G1 570 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-211ENST00000553882 CHODLQ9H9P2 273 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 CTSZQ9UBR2 303 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 CGB1A6NKQ9 187 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 NDUFB3O43676 98 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 SLC25A17O43808 307 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 CA1P00915 261 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-211ENST00000553882 LHFPL4Q7Z7J7 247 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 MISP3Q96FF7 219 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 SLC25A2Q9BXI2 301 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 SERTAD4Q9NUC0 356 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 TMEM106BQ9NUM4 274 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 LY96Q9Y6Y9 160 aa11.78□□□□□ -0.52
ACTN1-211ENST00000553882 USF1P22415 310 aaPredicted RBP11.77□□□□□ -0.52
ACTN1-211ENST00000553882 KIAA1644Q3SXP7 199 aa11.77□□□□□ -0.52
ACTN1-211ENST00000553882 TMEM177Q53S58 311 aa11.77□□□□□ -0.52
ACTN1-211ENST00000553882 MRPL36Q9P0J6 103 aaKnown RBP11.77□□□□□ -0.52
ACTN1-211ENST00000553882 MALRD1Q5VYJ5 2156 aa11.77□□□□□ -0.53
ACTN1-211ENST00000553882 RNF224P0DH78 156 aa11.77□□□□□ -0.53
ACTN1-211ENST00000553882 RAB4BP61018 213 aa11.77□□□□□ -0.53
ACTN1-211ENST00000553882 LRRC10Q5BKY1 277 aa11.77□□□□□ -0.53
ACTN1-211ENST00000553882 GFRALQ6UXV0 394 aa11.77□□□□□ -0.53
ACTN1-211ENST00000553882 BAGE3Q86Y29 109 aa11.77□□□□□ -0.53
ACTN1-211ENST00000553882 BAGE2Q86Y30 109 aa11.77□□□□□ -0.53
ACTN1-211ENST00000553882 FAM167A-AS1Q96KT0 104 aa11.77□□□□□ -0.53
ACTN1-211ENST00000553882 NOL4LQ96MY1 436 aaPredicted RBP11.77□□□□□ -0.53
ACTN1-211ENST00000553882 DNAJC4Q9NNZ3 241 aa11.77□□□□□ -0.53
ACTN1-211ENST00000553882 ZNF355PQ9NSJ1 428 aa11.77□□□□□ -0.53
ACTN1-211ENST00000553882 ENSAO43768 121 aaKnown RBP11.76□□□□□ -0.53
ACTN1-211ENST00000553882 COX7A2P2O60397 106 aa11.76□□□□□ -0.53
ACTN1-211ENST00000553882 C19orf35Q6ZS72 473 aa11.76□□□□□ -0.53
ACTN1-211ENST00000553882 NAT8BQ9UHF3 227 aa11.76□□□□□ -0.53
ACTN1-211ENST00000553882 NAGKQ9UJ70 344 aa11.76□□□□□ -0.53
ACTN1-211ENST00000553882 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
ACTN1-211ENST00000553882 PSMB11A5LHX3 300 aa11.76□□□□□ -0.53
ACTN1-211ENST00000553882 ZNF705FA8MVS1 300 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-211ENST00000553882 ZNF705DP0CH99 300 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-211ENST00000553882 ZNF705BP0CI00 300 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-211ENST00000553882 TDGF1P3P51864 188 aa11.76□□□□□ -0.53
ACTN1-211ENST00000553882 SELENOTP62341 195 aa11.76□□□□□ -0.53
ACTN1-211ENST00000553882 PRR30Q53SZ7 412 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-211ENST00000553882 MRPL54Q6P161 138 aaKnown RBP11.76□□□□□ -0.53
ACTN1-211ENST00000553882 CACNG8Q8WXS5 425 aa11.76□□□□□ -0.53
ACTN1-211ENST00000553882 NDUFAF3Q9BU61 184 aa11.76□□□□□ -0.53
ACTN1-211ENST00000553882 DYNLRB1Q9NP97 96 aa11.76□□□□□ -0.53
ACTN1-211ENST00000553882 ASH1LQ9NR48 2969 aaKnown RBP11.76□□□□□ -0.53
ACTN1-211ENST00000553882 POLR3KQ9Y2Y1 108 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-211ENST00000553882 A0A1W2PRE2 83 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 IGLV2-8P01709 118 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 LOXP28300 417 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-211ENST00000553882 ATP5IP56385 69 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-211ENST00000553882 TCF15Q12870 199 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 IBA57Q5T440 356 aaKnown RBP11.75□□□□□ -0.53
ACTN1-211ENST00000553882 RUSC1-AS1Q66K80 236 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 HCP5Q6MZN7 132 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 Q6ZWC4 215 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 TGIF2LXQ8IUE1 241 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 TMEM167AQ8TBQ9 72 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 C19orf24Q9BVV8 132 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 TRAV9-1A0A075B6T8 112 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 TRAV34A0A0B4J273 112 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 IGLV2-23P01705 113 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 PDPNQ86YL7 162 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 RNASE6Q93091 150 aaKnown RBP11.75□□□□□ -0.53
ACTN1-211ENST00000553882 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-211ENST00000553882 WASHC3Q9Y3C0 194 aa11.75□□□□□ -0.53
ACTN1-211ENST00000553882 IGHV3-21A0A0B4J1V1 117 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 A0A1W2PN81 502 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 A0A1W2PPI3 338 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 MOSP00540 346 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 PPOXP50336 477 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 C10orf113Q5VZT2 155 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 PATE2Q6UY27 113 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 PNKDQ8N490 385 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 Q8NA96 180 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 VSTM2AQ8TAG5 236 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 TMEM186Q96B77 213 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 IGF2BP2-AS1Q96M15 143 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 TBX15Q96SF7 602 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 HSPB9Q9BQS6 159 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 CBLN4Q9NTU7 201 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 CX3CL1P78423 397 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 TOMM20LQ6UXN7 152 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 FAM168AQ92567 244 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 ST6GALNAC6Q969X2 333 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms