RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 OTORQ9NRC9 128 aa12.75□□□□□ -0.37
ARHGEF40-202ENST00000553709 A0A1W2PRE2 83 aa12.75□□□□□ -0.37
ARHGEF40-202ENST00000553709 EFNB3Q15768 340 aa12.75□□□□□ -0.37
ARHGEF40-202ENST00000553709 C18orf15Q96N68 181 aa12.75□□□□□ -0.37
ARHGEF40-202ENST00000553709 PRSS2P07478 247 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 GCSAMLQ5JQS6 135 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 Q5PR19 223 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 OR11H12B2RN74 326 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 NBR2O15453 112 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 RNF144BQ7Z419 303 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 OR11H1Q8NG94 326 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 OR11H2Q8NH07 326 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 DUX5Q96PT3 197 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 OSTCQ9NRP0 149 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 MUC21A0A0G2JKD1 596 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 MUC21A0A140T8X8 626 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 TCRBV4S1A1TA0A5B7 111 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 ADMP35318 185 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 GNG5P63218 68 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 MUC21Q5SSG8 566 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 REG4Q9BYZ8 158 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 TMEM160Q9NX00 188 aa12.74□□□□□ -0.37
ARHGEF40-202ENST00000553709 UBE2CO00762 179 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 ZNF124Q15973 351 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 ZNF256Q9Y2P7 627 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 M0R381 172 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 JOSD1Q15040 202 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 PRSS8Q16651 343 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 NMSQ5H8A3 153 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 ZCCHC24Q8N2G6 241 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 IGHV3OR16-8A0A075B7F1 116 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 SRRM5B3KS81 715 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 ASIPP42127 132 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 TMEM42Q69YG0 159 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 OCC1Q8TAD7 63 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 PGPEP1LA6NFU8 196 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 FHL1Q13642 323 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 PAPPA-AS1Q5QFB9 102 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 PRDM13Q9H4Q3 707 aa12.73□□□□□ -0.37
ARHGEF40-202ENST00000553709 COLCA2A8K830 154 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 IGKV3-20P01619 116 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 PYYP10082 97 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 CD59P13987 128 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 NRN1Q9NPD7 142 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 EPDR1Q9UM22 224 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 TRAV1-1A0A0B4J248 108 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 ADIPOQQ15848 244 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 FER1L6-AS1Q8NA97 138 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 TMEM242Q9NWH2 141 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 IGHV1-46P01743 117 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 FOXF2Q12947 444 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 TREML4Q6UXN2 200 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 CLEC19AQ6UXS0 136 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 CENPVQ7Z7K6 275 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 EP300Q09472 2414 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 KIAA1671Q9BY89 1806 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 A0A1B0GW64 132 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 PSPNO60542 156 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 PVRIGQ6DKI7 326 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 ORMDL3Q8N138 153 aa12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 PEF1Q9UBV8 284 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-202ENST00000553709 TRAV8-6A0A0B4J262 113 aa12.71□□□□□ -0.37
ARHGEF40-202ENST00000553709 TEX38Q6PEX7 206 aa12.71□□□□□ -0.37
ARHGEF40-202ENST00000553709 ARL6IP6Q8N6S5 226 aa12.71□□□□□ -0.37
ARHGEF40-202ENST00000553709 A0A0G2JLM5 398 aa12.71□□□□□ -0.37
ARHGEF40-202ENST00000553709 Q0VFX4 171 aa12.71□□□□□ -0.37
ARHGEF40-202ENST00000553709 CEACAM4O75871 244 aa12.71□□□□□ -0.38
ARHGEF40-202ENST00000553709 ATP5LO75964 103 aa12.71□□□□□ -0.38
ARHGEF40-202ENST00000553709 SRSF4Q08170 494 aaKnown RBP12.71□□□□□ -0.38
ARHGEF40-202ENST00000553709 RNASE6Q93091 150 aaKnown RBP12.71□□□□□ -0.38
ARHGEF40-202ENST00000553709 PRB3Q04118 309 aaPredicted RBP12.71□□□□□ -0.38
ARHGEF40-202ENST00000553709 TRBV24-1A0A075B6N3 115 aa12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 C9JCJ5 164 aa12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 IL18BPO95998 194 aa12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 PPP1R17O96001 155 aa12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 SMIM13P0DJ93 91 aa12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 RNF125Q96EQ8 232 aa12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 ST6GALNAC6Q969X2 333 aa12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 RPUSD1Q9UJJ7 312 aaKnown RBP12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 IGKV1-5P01602 117 aa12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 DMRTA2Q96SC8 542 aa12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 SSBP4Q9BWG4 385 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 PLSCR4Q9NRQ2 329 aa12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 TP53BP1Q12888 1972 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 CIRBPQ14011 172 aaKnown RBP12.7□□□□□ -0.38
ARHGEF40-202ENST00000553709 GGTLC1Q9BX51 225 aa12.69□□□□□ -0.38
ARHGEF40-202ENST00000553709 STAG3L3P0CL85 134 aa12.69□□□□□ -0.38
ARHGEF40-202ENST00000553709 C1QL4Q86Z23 238 aa12.69□□□□□ -0.38
ARHGEF40-202ENST00000553709 GLRX5Q86SX6 157 aa12.69□□□□□ -0.38
ARHGEF40-202ENST00000553709 GEMIN7Q9H840 131 aaKnown RBP12.69□□□□□ -0.38
ARHGEF40-202ENST00000553709 CXCL1P09341 107 aa12.69□□□□□ -0.38
ARHGEF40-202ENST00000553709 COL4A4P53420 1690 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 TRBV6-6A0A0A6YYG2 114 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 SNAI2O43623 268 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 ZNF257Q9Y2Q1 563 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 NDUFAF3Q9BU61 184 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 GNB1LQ9BYB4 327 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 TMEM14EPQ6UXP3 125 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 OR10W1Q8NGF6 305 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms