RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 IGKV1D-8A0A087WSZ0 117 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 A0A087WV48 116 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 STAG3L3P0CL85 134 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 LINC01559Q495D7 138 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 ARL6IP6Q8N6S5 226 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 SPTA1P02549 2419 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 TRBV6-6A0A0A6YYG2 114 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 TRAV21A0A0B4J279 112 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 PINLYPA6NC86 204 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 EFNA2O43921 213 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 THBDP07204 575 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 C21orf62-AS1Q17RA5 79 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 C8orf46Q8TAG6 207 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 C14orf144Q96I85 54 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 RNF5Q99942 180 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 WFDC1Q9HC57 220 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 TRBV24-1A0A075B6N3 115 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-208ENST00000553289 IGHV1-46P01743 117 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 C1QTNF9P0C862 333 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 RNASE7Q9H1E1 156 aaKnown RBP9.58□□□□□ -0.88
SYNE2-208ENST00000553289 PSG8Q9UQ74 426 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 ADMP35318 185 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 CHCHD1Q96BP2 118 aaKnown RBP9.58□□□□□ -0.88
SYNE2-208ENST00000553289 GREB1Q4ZG55 1949 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 DICER1Q9UPY3 1922 aaKnown RBP9.58□□□□□ -0.88
SYNE2-208ENST00000553289 TEX38Q6PEX7 206 aa9.58□□□□□ -0.88
SYNE2-208ENST00000553289 HBDP02042 147 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 RNASE4P34096 147 aaKnown RBP9.57□□□□□ -0.88
SYNE2-208ENST00000553289 FGFBP3Q8TAT2 258 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 TSKUQ8WUA8 353 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 TMEM262E9PQX1 116 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 F2Z2F3 143 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 CD55P08174 381 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 OOSP1A8MZH6 123 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 UBE2CO00762 179 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 TMEM50AO95807 157 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 NAPSAO96009 420 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 HEPN1Q6WQI6 88 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 COLCA1Q6ZS62 124 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 NDUFAF3Q9BU61 184 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 PRSS22Q9GZN4 317 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
SYNE2-208ENST00000553289 NIT1Q86X76 327 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 OR13C6PQ8NH95 151 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 ITLN2Q8WWU7 325 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-208ENST00000553289 ST20Q9HBF5 79 aa9.57□□□□□ -0.88
SYNE2-208ENST00000553289 PSMB11A5LHX3 300 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 GNG5P63218 68 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 SRSF1Q07955 248 aaKnown RBP eCLIP9.56□□□□□ -0.88
SYNE2-208ENST00000553289 OCC1Q8TAD7 63 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 CLPSP04118 112 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 TMEM42Q69YG0 159 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 TREML4Q6UXN2 200 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 FAM19A2Q8N3H0 131 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 C5orf30Q96GV9 206 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 LINC00614P0C842 121 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 RASL11AQ6T310 242 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 Q6ZS49 121 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 TMEM167AQ8TBQ9 72 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 DMRTA2Q96SC8 542 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 IGKV3OR2-268A0A0C4DH90 116 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 OVOL1O14753 267 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 CD59P13987 128 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 SUPT4H1P63272 117 aaKnown RBP9.56□□□□□ -0.88
SYNE2-208ENST00000553289 RHOGP84095 191 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
SYNE2-208ENST00000553289 C1QL4Q86Z23 238 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 LINC01587Q99440 93 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 LAMTOR2Q9Y2Q5 125 aa9.56□□□□□ -0.88
SYNE2-208ENST00000553289 EMP1P54849 157 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 NMSQ5H8A3 153 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 GGTLC1Q9BX51 225 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 CYTL1Q9NRR1 136 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 BEX4Q9NWD9 120 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-208ENST00000553289 ICE1Q9Y2F5 2266 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 DOCK6Q96HP0 2047 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 GHRHP01286 108 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 OR5AN1Q8NGI8 311 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 PNRC2Q9NPJ4 139 aaKnown RBP9.55□□□□□ -0.88
SYNE2-208ENST00000553289 TIMM23O14925 209 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 PYYP10082 97 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 IFI27P40305 119 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-208ENST00000553289 FOXL1Q12952 345 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 ZNF418Q8TF45 676 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-208ENST00000553289 HEATR5BQ9P2D3 2071 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 SCN8AQ9UQD0 1980 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 TGFAP01135 160 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms