RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 NUPL2O15504 423 aaKnown RBP14.41□□□□□ -0.1
PTCH1-227ENST00000553256 SRPXP78539 464 aa14.41□□□□□ -0.1
PTCH1-227ENST00000553256 TNFRSF9Q07011 255 aa14.41□□□□□ -0.1
PTCH1-227ENST00000553256 PPP1R1AQ13522 171 aa14.41□□□□□ -0.1
PTCH1-227ENST00000553256 HAGHQ16775 308 aa14.41□□□□□ -0.1
PTCH1-227ENST00000553256 TMED4Q7Z7H5 227 aa14.41□□□□□ -0.1
PTCH1-227ENST00000553256 OR4X1Q8NH49 305 aa14.41□□□□□ -0.1
PTCH1-227ENST00000553256 SMPXQ9UHP9 88 aa14.41□□□□□ -0.1
PTCH1-227ENST00000553256 DUXBA0A1W2PPF3 345 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 RBMY1BA6NDE4 496 aaKnown RBP14.4□□□□□ -0.1
PTCH1-227ENST00000553256 RBMY1EA6NEQ0 496 aaKnown RBP14.4□□□□□ -0.1
PTCH1-227ENST00000553256 TSPAN4O14817 238 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 NDUFB6O95139 128 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 SFT2D2O95562 160 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 IGKV1-17P01599 117 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 RBMY1DP0C7P1 496 aaKnown RBP14.4□□□□□ -0.1
PTCH1-227ENST00000553256 IL7P13232 177 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 HTR2BP41595 481 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 SUB1P53999 127 aaKnown RBP eCLIP14.4□□□□□ -0.1
PTCH1-227ENST00000553256 RELQ04864 619 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-227ENST00000553256 SMCO1Q147U7 214 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 RBMS2Q15434 407 aaKnown RBP14.4□□□□□ -0.1
PTCH1-227ENST00000553256 FAM90A2PQ658T7 463 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 TOMM20LQ6UXN7 152 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 DEFB125Q8N687 156 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 DUSP18Q8NEJ0 188 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 RCHY1Q96PM5 261 aa14.4□□□□□ -0.1
PTCH1-227ENST00000553256 IGHV7-4-1A0A0J9YVY3 117 aa14.39□□□□□ -0.11
PTCH1-227ENST00000553256 A0A1B0GU03 582 aa14.39□□□□□ -0.11
PTCH1-227ENST00000553256 NAP1L6A6NFF2 107 aa14.39□□□□□ -0.11
PTCH1-227ENST00000553256 CHEK1O14757 476 aa14.39□□□□□ -0.11
PTCH1-227ENST00000553256 ZNF207O43670 478 aaKnown RBP14.39□□□□□ -0.11
PTCH1-227ENST00000553256 CLN5O75503 358 aa14.39□□□□□ -0.11
PTCH1-227ENST00000553256 SCAF4O95104 1147 aaKnown RBP14.39□□□□□ -0.11
PTCH1-227ENST00000553256 NPBWR1P48145 328 aa14.39□□□□□ -0.11
PTCH1-227ENST00000553256 GUCA2BQ16661 112 aa14.39□□□□□ -0.11
PTCH1-227ENST00000553256 SLC24A4Q8NFF2 622 aa14.39□□□□□ -0.11
PTCH1-227ENST00000553256 CITED4Q96RK1 184 aa14.39□□□□□ -0.11
PTCH1-227ENST00000553256 CACFD1Q9UGQ2 172 aa14.39□□□□□ -0.11
PTCH1-227ENST00000553256 PLA2G10O15496 165 aa14.38□□□□□ -0.11
PTCH1-227ENST00000553256 GNG7O60262 68 aa14.38□□□□□ -0.11
PTCH1-227ENST00000553256 NXPH3O95157 252 aa14.38□□□□□ -0.11
PTCH1-227ENST00000553256 SLC25A6P12236 298 aa14.38□□□□□ -0.11
PTCH1-227ENST00000553256 ANXA3P12429 323 aa14.38□□□□□ -0.11
PTCH1-227ENST00000553256 UBE2MP61081 183 aaKnown RBP14.38□□□□□ -0.11
PTCH1-227ENST00000553256 PRSS54Q6PEW0 395 aa14.38□□□□□ -0.11
PTCH1-227ENST00000553256 LILRB2Q8N423 598 aa14.38□□□□□ -0.11
PTCH1-227ENST00000553256 TMEM116Q8NCL8 245 aa14.38□□□□□ -0.11
PTCH1-227ENST00000553256 RNASEH2CQ8TDP1 164 aaKnown RBP14.38□□□□□ -0.11
PTCH1-227ENST00000553256 SPAG8Q99932 426 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-227ENST00000553256 C20orf24Q9BUV8 137 aa14.38□□□□□ -0.11
PTCH1-227ENST00000553256 VSIRQ9H7M9 311 aa14.38□□□□□ -0.11
PTCH1-227ENST00000553256 ENY2Q9NPA8 101 aa14.38□□□□□ -0.11
PTCH1-227ENST00000553256 A6NHS1 94 aa14.37□□□□□ -0.11
PTCH1-227ENST00000553256 OR11H12B2RN74 326 aa14.37□□□□□ -0.11
PTCH1-227ENST00000553256 ZNF600Q6ZNG1 722 aa14.37□□□□□ -0.11
PTCH1-227ENST00000553256 CENPSQ8N2Z9 138 aa14.37□□□□□ -0.11
PTCH1-227ENST00000553256 RNF2Q99496 336 aa14.37□□□□□ -0.11
PTCH1-227ENST00000553256 RBKSQ9H477 322 aa14.37□□□□□ -0.11
PTCH1-227ENST00000553256 HEYLQ9NQ87 328 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-227ENST00000553256 FLVCR2Q9UPI3 526 aa14.37□□□□□ -0.11
PTCH1-227ENST00000553256 SACSQ9NZJ4 4579 aa14.37□□□□□ -0.11
PTCH1-227ENST00000553256 APOHP02749 345 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-227ENST00000553256 IGLC1P0CG04 106 aa14.36□□□□□ -0.11
PTCH1-227ENST00000553256 OPRK1P41145 380 aa14.36□□□□□ -0.11
PTCH1-227ENST00000553256 TRIQKQ629K1 86 aa14.36□□□□□ -0.11
PTCH1-227ENST00000553256 LINC00299Q6ZSB3 139 aa14.36□□□□□ -0.11
PTCH1-227ENST00000553256 C7orf50Q9BRJ6 194 aaKnown RBP14.36□□□□□ -0.11
PTCH1-227ENST00000553256 RHPN1-AS1Q9BWJ2 59 aa14.36□□□□□ -0.11
PTCH1-227ENST00000553256 EDA2RQ9HAV5 297 aa14.36□□□□□ -0.11
PTCH1-227ENST00000553256 PUS1Q9Y606 427 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTCH1-227ENST00000553256 C9orf170A2RU37 121 aa14.35□□□□□ -0.11
PTCH1-227ENST00000553256 CEBPZOSA8MTT3 80 aa14.35□□□□□ -0.11
PTCH1-227ENST00000553256 VAMP1P23763 118 aa14.35□□□□□ -0.11
PTCH1-227ENST00000553256 NPY1RP25929 384 aa14.35□□□□□ -0.11
PTCH1-227ENST00000553256 ODF3L2Q3SX64 289 aa14.35□□□□□ -0.11
PTCH1-227ENST00000553256 DTD1Q8TEA8 209 aa14.35□□□□□ -0.11
PTCH1-227ENST00000553256 HIPK2Q9H2X6 1198 aa14.35□□□□□ -0.11
PTCH1-227ENST00000553256 SRD5A3Q9H8P0 318 aa14.35□□□□□ -0.11
PTCH1-227ENST00000553256 TMED3Q9Y3Q3 217 aa14.35□□□□□ -0.11
PTCH1-227ENST00000553256 U3KQ87 197 aa14.35□□□□□ -0.11
PTCH1-227ENST00000553256 TRAV14DV4A0A0A6YYC5 116 aa14.34□□□□□ -0.11
PTCH1-227ENST00000553256 RBPMS2Q6ZRY4 209 aaKnown RBP14.34□□□□□ -0.11
PTCH1-227ENST00000553256 SLC16A13Q7RTY0 426 aa14.34□□□□□ -0.11
PTCH1-227ENST00000553256 OR52B4Q8NGK2 314 aa14.34□□□□□ -0.11
PTCH1-227ENST00000553256 FAM110AQ9BQ89 295 aa14.34□□□□□ -0.11
PTCH1-227ENST00000553256 TUBA4BQ9H853 241 aa14.34□□□□□ -0.11
PTCH1-227ENST00000553256 U3KQE9 123 aa14.34□□□□□ -0.11
PTCH1-227ENST00000553256 RYR2Q92736 4967 aa14.33□□□□□ -0.11
PTCH1-227ENST00000553256 PIGBOS1A0A0B4J2F0 54 aa14.33□□□□□ -0.12
PTCH1-227ENST00000553256 FAM90A26D6RGX4 464 aa14.33□□□□□ -0.12
PTCH1-227ENST00000553256 YIF1AO95070 293 aa14.33□□□□□ -0.12
PTCH1-227ENST00000553256 SLC25A4P12235 298 aa14.33□□□□□ -0.12
PTCH1-227ENST00000553256 TIGITQ495A1 244 aa14.33□□□□□ -0.12
PTCH1-227ENST00000553256 ST8SIA2Q92186 375 aa14.33□□□□□ -0.12
PTCH1-227ENST00000553256 IGHV3-49A0A0A0MS15 119 aa14.32□□□□□ -0.12
PTCH1-227ENST00000553256 CRYBB3P26998 211 aa14.32□□□□□ -0.12
PTCH1-227ENST00000553256 RND2P52198 227 aa14.32□□□□□ -0.12
PTCH1-227ENST00000553256 ATP5IP56385 69 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-227ENST00000553256 DHRS2Q13268 280 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms