RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TMEM219Q86XT9 240 aa15.45■□□□□ 0.06
RBFOX1-215ENST00000553186 C5orf56Q8N8D9 126 aa15.45■□□□□ 0.06
RBFOX1-215ENST00000553186 NPIPB3Q92617 1050 aa15.45■□□□□ 0.06
RBFOX1-215ENST00000553186 SLC25A33Q9BSK2 321 aa15.45■□□□□ 0.06
RBFOX1-215ENST00000553186 C9JQL5 133 aa15.45■□□□□ 0.06
RBFOX1-215ENST00000553186 LINC00869P0C866 280 aa15.45■□□□□ 0.06
RBFOX1-215ENST00000553186 GUK1Q16774 197 aa15.45■□□□□ 0.06
RBFOX1-215ENST00000553186 ETFRF1Q6IPR1 90 aa15.45■□□□□ 0.06
RBFOX1-215ENST00000553186 SLC25A22Q9H936 323 aa15.45■□□□□ 0.06
RBFOX1-215ENST00000553186 TMEM218A2RU14 115 aa15.44■□□□□ 0.06
RBFOX1-215ENST00000553186 NPIPB5A8MRT5 1133 aa15.44■□□□□ 0.06
RBFOX1-215ENST00000553186 OR10J1P30954 320 aa15.44■□□□□ 0.06
RBFOX1-215ENST00000553186 SLC39A9Q9NUM3 307 aa15.44■□□□□ 0.06
RBFOX1-215ENST00000553186 CCDC168Q8NDH2 2452 aa15.44■□□□□ 0.06
RBFOX1-215ENST00000553186 CTXND1A0A1B0GTU2 59 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 MAP1LC3B2A6NCE7 125 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 SEC14L6B5MCN3 397 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 MT-CO2P00403 227 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 BPIFB3P59826 476 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 FAM122CQ6P4D5 195 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 TMEM116Q8NCL8 245 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 RAB24Q969Q5 203 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 NARS2Q96I59 477 aaKnown RBP15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 ACTR3CQ9C0K3 210 aaPredicted RBP15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 MAP1LC3BQ9GZQ8 125 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 TREM1Q9NP99 234 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 ZNF469Q96JG9 3925 aaPredicted RBP15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 FASNP49327 2511 aaKnown RBP15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 IGKV1D-37A0A075B6S9 117 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 I3L2K1 104 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 CYB5BO43169 146 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 FSHBP01225 129 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 AMY1AP04745 511 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 RND2P52198 227 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 FGF8P55075 233 aaPredicted RBP15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 TTC9CQ8N5M4 171 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 THAP8Q8NA92 274 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 MOB4Q9Y3A3 225 aa15.43■□□□□ 0.06
RBFOX1-215ENST00000553186 ITPR3Q14573 2671 aa15.42■□□□□ 0.06
RBFOX1-215ENST00000553186 H3BUX3 64 aa15.42■□□□□ 0.06
RBFOX1-215ENST00000553186 HMGB3O15347 200 aaKnown RBP15.42■□□□□ 0.06
RBFOX1-215ENST00000553186 GATA2P23769 480 aaPredicted RBP15.42■□□□□ 0.06
RBFOX1-215ENST00000553186 CIARTQ8N365 385 aaPredicted RBP15.42■□□□□ 0.06
RBFOX1-215ENST00000553186 OR1L6Q8NGR2 347 aa15.42■□□□□ 0.06
RBFOX1-215ENST00000553186 RARRES2Q99969 163 aa15.42■□□□□ 0.06
RBFOX1-215ENST00000553186 EIF5A2Q9GZV4 153 aaKnown RBP15.42■□□□□ 0.06
RBFOX1-215ENST00000553186 IGHV3-21A0A0B4J1V1 117 aa15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 ADCYAP1P18509 176 aa15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 CDC34P49427 236 aaPredicted RBP15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 CYB5R2Q6BCY4 276 aa15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 BCL6BQ8N143 479 aaPredicted RBP15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 SGMS2Q8NHU3 365 aa15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 FANCD2OSQ96PS1 177 aa15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 PBDC1Q9BVG4 233 aa15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 A6NDX4 124 aa15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 RBFOX3A6NFN3 312 aa15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 SH2D7A6NKC9 451 aaPredicted RBP15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 K7EIM0 57 aa15.41■□□□□ 0.06
RBFOX1-215ENST00000553186 MDFIC2A0A1B0GVS7 189 aa15.4■□□□□ 0.06
RBFOX1-215ENST00000553186 LINC01548A6NM66 108 aa15.4■□□□□ 0.06
RBFOX1-215ENST00000553186 PEA15Q15121 130 aa15.4■□□□□ 0.06
RBFOX1-215ENST00000553186 CYP2G1PQ6ZSU1 146 aa15.4■□□□□ 0.06
RBFOX1-215ENST00000553186 TEX15Q9BXT5 2789 aa15.4■□□□□ 0.06
RBFOX1-215ENST00000553186 HECTD1Q9ULT8 2610 aa15.4■□□□□ 0.06
RBFOX1-215ENST00000553186 IGLV11-55A0A075B6I3 123 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 TCRBV4S1A1TA0A5B7 111 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 ATP6V0E1O15342 81 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 ZNF90Q03938 601 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 FOXC2Q99958 501 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 ZFP92A6NM28 416 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 PMS2P11Q13670 270 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 LY6EQ16553 131 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 HAGHQ16775 308 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 DEFB112Q30KQ8 113 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 NANPQ8TBE9 248 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 C22orf15Q8WYQ4 148 aa15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 SEPSECSQ9HD40 501 aaKnown RBP15.39■□□□□ 0.05
RBFOX1-215ENST00000553186 A0A1W2PPV4 95 aa15.38■□□□□ 0.05
RBFOX1-215ENST00000553186 C10orf91Q5T1B1 145 aa15.38■□□□□ 0.05
RBFOX1-215ENST00000553186 GNG13Q9P2W3 67 aa15.38■□□□□ 0.05
RBFOX1-215ENST00000553186 SFTA3P0C7M3 94 aa15.38■□□□□ 0.05
RBFOX1-215ENST00000553186 ZNF506Q5JVG8 444 aa15.38■□□□□ 0.05
RBFOX1-215ENST00000553186 OR5T1Q8NG75 326 aa15.38■□□□□ 0.05
RBFOX1-215ENST00000553186 OR4X1Q8NH49 305 aa15.38■□□□□ 0.05
RBFOX1-215ENST00000553186 TMPRSS5Q9H3S3 457 aa15.38■□□□□ 0.05
RBFOX1-215ENST00000553186 SMDT1Q9H4I9 107 aa15.38■□□□□ 0.05
RBFOX1-215ENST00000553186 TNFRSF19Q9NS68 423 aa15.38■□□□□ 0.05
RBFOX1-215ENST00000553186 PSMB11A5LHX3 300 aa15.37■□□□□ 0.05
RBFOX1-215ENST00000553186 TSPAN9O75954 239 aa15.37■□□□□ 0.05
RBFOX1-215ENST00000553186 ICAM4Q14773 271 aa15.37■□□□□ 0.05
RBFOX1-215ENST00000553186 C9orf139Q6ZV77 190 aa15.37■□□□□ 0.05
RBFOX1-215ENST00000553186 TRGV9Q99603 122 aa15.37■□□□□ 0.05
RBFOX1-215ENST00000553186 APOC3P02656 99 aa15.36■□□□□ 0.05
RBFOX1-215ENST00000553186 STAG3L2P0CL84 134 aa15.36■□□□□ 0.05
RBFOX1-215ENST00000553186 STAG3L3P0CL85 134 aa15.36■□□□□ 0.05
RBFOX1-215ENST00000553186 PPT1P50897 306 aa15.36■□□□□ 0.05
RBFOX1-215ENST00000553186 SELENOTP62341 195 aa15.36■□□□□ 0.05
RBFOX1-215ENST00000553186 SPATA31B1PQ5VZV4 182 aa15.36■□□□□ 0.05
RBFOX1-215ENST00000553186 UNQ5815/PRO19632Q6UWF5 114 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms