RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 OPRK1P41145 380 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 RORCP51449 518 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 SUB1P53999 127 aaKnown RBP eCLIP8.37□□□□□ -1.07
NEK3-204ENST00000552973 RND3P61587 244 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 LHFPL1Q86WI0 220 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 STXBP6Q8NFX7 210 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 OR4D10Q8NGI6 311 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 TMEM230Q96A57 120 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 MFFQ9GZY8 342 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 C11orf68Q9H3H3 251 aaKnown RBP8.37□□□□□ -1.07
NEK3-204ENST00000552973 FNDC4Q9H6D8 234 aaPredicted RBP8.37□□□□□ -1.07
NEK3-204ENST00000552973 ENY2Q9NPA8 101 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 COPZ2Q9P299 210 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 IGLL5B9A064 214 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 CLN5O75503 358 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 TNFAIP8O95379 198 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 CD5P06127 495 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 TIGITQ495A1 244 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 SCGB2B2Q4G0G5 96 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 PVRIGQ6DKI7 326 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 Q6ZRM9 215 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 RNASE11Q8TAA1 199 aaKnown RBP8.36□□□□□ -1.07
NEK3-204ENST00000552973 C2CD4CQ8TF44 421 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 ZNF486Q96H40 463 aaPredicted RBP8.36□□□□□ -1.07
NEK3-204ENST00000552973 METTL26Q96S19 204 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 KRTAP17-1Q9BYP8 105 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 NAA50Q9GZZ1 169 aaKnown RBP8.36□□□□□ -1.07
NEK3-204ENST00000552973 EXTL2Q9UBQ6 330 aa8.36□□□□□ -1.07
NEK3-204ENST00000552973 A0A1W2PS18 150 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 INS-IGF2F8WCM5 200 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 K7EQG2 157 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 CORTO00230 105 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 ATG12O94817 140 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 GIG44P09565 113 aaPredicted RBP8.35□□□□□ -1.07
NEK3-204ENST00000552973 ZNF688P0C7X2 276 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 P2RY1P47900 373 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 MZT2AQ6P582 158 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 OR13C8Q8NGS7 320 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 MARCH1Q8TCQ1 289 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 RRNAD1Q96FB5 475 aaKnown RBP8.35□□□□□ -1.07
NEK3-204ENST00000552973 ABHD1Q96SE0 405 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 TMEM231Q9H6L2 316 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 CLEC5AQ9NY25 188 aa8.35□□□□□ -1.07
NEK3-204ENST00000552973 TRAV2A0A0B4J234 112 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 IGHV4-28A0A0C4DH34 117 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 RAB3DO95716 219 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 RBMY1A1P0DJD3 496 aaKnown RBP8.34□□□□□ -1.07
NEK3-204ENST00000552973 RBMY1CP0DJD4 496 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 RBMY1FQ15415 496 aaKnown RBP8.34□□□□□ -1.07
NEK3-204ENST00000552973 ACTL10Q5JWF8 245 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 FAAP20Q6NZ36 180 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 TRPT1Q86TN4 253 aaKnown RBP8.34□□□□□ -1.07
NEK3-204ENST00000552973 ARRDC1Q8N5I2 433 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 CCDC71LQ8N9Z2 235 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 Q8NAQ8 132 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 OR4X1Q8NH49 305 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 TERB2Q8NHR7 220 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 ZFAND1Q8TCF1 268 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 MTFP1Q9UDX5 166 aa8.34□□□□□ -1.07
NEK3-204ENST00000552973 NXPH3O95157 252 aa8.33□□□□□ -1.08
NEK3-204ENST00000552973 IGKV1-17P01599 117 aa8.33□□□□□ -1.08
NEK3-204ENST00000552973 OR5AC1P0C628 307 aa8.33□□□□□ -1.08
NEK3-204ENST00000552973 C4BPBP20851 252 aa8.33□□□□□ -1.08
NEK3-204ENST00000552973 UCP1P25874 307 aa8.33□□□□□ -1.08
NEK3-204ENST00000552973 CRYBB3P26998 211 aa8.33□□□□□ -1.08
NEK3-204ENST00000552973 RPL5P46777 297 aaKnown RBP8.33□□□□□ -1.08
NEK3-204ENST00000552973 TMEM229BQ8NBD8 167 aa8.33□□□□□ -1.08
NEK3-204ENST00000552973 LHFPL5Q8TAF8 219 aa8.33□□□□□ -1.08
NEK3-204ENST00000552973 APLNQ9ULZ1 77 aa8.33□□□□□ -1.08
NEK3-204ENST00000552973 ELOA3CA0A087WX78 387 aaPredicted RBP8.32□□□□□ -1.08
NEK3-204ENST00000552973 ZNF182P17025 639 aaPredicted RBP8.32□□□□□ -1.08
NEK3-204ENST00000552973 HLA-DMBP28068 263 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 RND2P52198 227 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 TAS2R19P59542 299 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 SPCS3P61009 180 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 DHRS2Q13268 280 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 MEF2DQ14814 521 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 CTF1Q16619 201 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 BSXQ3C1V8 233 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 STEAP1BQ6NZ63 245 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 PRSS54Q6PEW0 395 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 ZNF767PQ75MW2 155 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 DCANP1Q8TF63 244 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 Q8WTZ3 238 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 AP3S1Q92572 193 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 GPR146Q96CH1 333 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 GRAMD2BQ96HH9 432 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 NARS2Q96I59 477 aaKnown RBP8.32□□□□□ -1.08
NEK3-204ENST00000552973 RTBDNQ9BSG5 229 aaPredicted RBP8.32□□□□□ -1.08
NEK3-204ENST00000552973 HEYLQ9NQ87 328 aaPredicted RBP8.32□□□□□ -1.08
NEK3-204ENST00000552973 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.32□□□□□ -1.08
NEK3-204ENST00000552973 X6R8D5 127 aa8.32□□□□□ -1.08
NEK3-204ENST00000552973 TRAV30A0A087WSZ9 112 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 TEX13DA0A0J9YY54 714 aaPredicted RBP8.31□□□□□ -1.08
NEK3-204ENST00000552973 RPS10-NUDT3A0A1W2PQS6 291 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 CEBPZOSA8MTT3 80 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 SCGB2A1O75556 95 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 CDS2O95674 445 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 CD74P04233 296 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 IGLC1P0CG04 106 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms