RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 PARM1Q6UWI2 310 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 PQLC2Q6ZP29 291 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 Q6ZR03 302 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 SSX8Q7RTT4 187 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 WDR31Q8NA23 367 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 SMRP1Q8NCR6 262 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 GJC3Q8NFK1 279 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 OR10G6Q8NH81 332 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 OR9G1Q8NH87 305 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 TSACCQ96A04 125 aaPredicted RBP4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 ZNF503Q96F45 646 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 ADTRPQ96IZ2 230 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 LINC01600Q96MT4 127 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 OXGR1Q96P68 337 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 CDX2Q99626 313 aaPredicted RBP4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 C20orf78Q9BR46 151 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 EMC6Q9BV81 110 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 C1QTNF4Q9BXJ3 329 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 PRSS22Q9GZN4 317 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 FGF23Q9GZV9 251 aaPredicted RBP4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 SERTAD4Q9NUC0 356 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 LIN7CQ9NUP9 197 aaKnown RBP4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 TMEM140Q9NV12 185 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 MPDZO75970 2070 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 POLR2AP24928 1970 aaKnown RBP4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 THADAQ6YHU6 1953 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 ADAMTS9Q9P2N4 1935 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 A0A096LNJ9 63 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 CENPVL3A0A0U1RRI6 287 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 A0A1W2PPV4 95 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 C10orf142B7Z368 130 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 H3BMG7 143 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 C16orf97H3BN30 126 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 M0R135 149 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 RHODO00212 210 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 SYNGR3O43761 229 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 PRKNO60260 465 aaPredicted RBP4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 CER1O95813 267 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 NCR2O95944 276 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 APOHP02749 345 aaPredicted RBP4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 SPINK8P0C7L1 97 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 MYF5P13349 255 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 OTX2P32243 289 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 UQCRFS1P47985 274 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 INSL3P51460 131 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 MFAP2P55001 183 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 GUSBP1Q15486 140 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 IBA57Q5T440 356 aaKnown RBP4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 FAM27BQ5VT28 67 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 Q6AWC8 147 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 FAM180AQ6UWF9 173 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 LINC00596Q86U02 117 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 MOGAT3Q86VF5 341 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 ZNF808Q8N4W9 903 aaPredicted RBP4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 OR51H1Q8NH63 302 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 OR1L3Q8NH93 324 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 BORCS8Q96FH0 119 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 ZNF799Q96GE5 643 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 COQ2Q96H96 371 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 C8orf49Q96NF6 230 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 TRIB1Q96RU8 372 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 NAA38Q9BRA0 125 aaKnown RBP4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 MRPL32Q9BYC8 188 aaKnown RBP4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 PKIBQ9C010 78 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 CHRNA10Q9GZZ6 450 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 RAB1BQ9H0U4 201 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 VCX2Q9H322 139 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 ZNF442Q9H7R0 627 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 TMEM167BQ9NRX6 74 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 DEPPQ9NTK1 212 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 UFC1Q9Y3C8 167 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 HILPDAQ9Y5L2 63 aa4.28□□□□□ -1.72
LSM3P2-201ENST00000551246 PHF3Q92576 2039 aaKnown RBP4.28□□□□□ -1.73
LSM3P2-201ENST00000551246 LOC102723996A0A087X1L8 192 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 CCL15-CCL14A0A0B4J2E2 113 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 TCRBV4S1A1TA0A5B7 111 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 GGTLC3B5MD39 225 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 M0QXV9 152 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 HOXA3O43365 443 aaPredicted RBP4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 SPINK4O60575 86 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 ZG16O60844 167 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 FOXH1O75593 365 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 B4GALT1P15291 398 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 TNFRSF1AP19438 455 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 CTGFP29279 349 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 MYCNOSP40205 109 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 FXYD2P54710 66 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 FOXA3P55318 350 aaPredicted RBP4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 CLRN1P58418 232 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 HHEXQ03014 270 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 FXYD3Q14802 87 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 EFNB3Q15768 340 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 TAL2Q16559 108 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 CCL15Q16663 113 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 RTL8BQ17RB0 113 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 C3orf36Q3SXR2 165 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 ETDBQ3ZM63 59 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 MIC13Q5XKP0 118 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms