RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ASPHD1Q5U4P2 390 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 WNT10AQ9GZT5 417 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 RND2P52198 227 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 ZNF90Q03938 601 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 BTN1A1Q13410 526 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 RAB31Q13636 194 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 IQCF2Q8IXL9 164 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 PSMG3-AS1Q96PY0 264 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 SLC35B3Q9H1N7 401 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 SRP19P09132 144 aaKnown RBP15.59■□□□□ 0.09
SSH1-209ENST00000551165 CEBPGP53567 150 aa15.59■□□□□ 0.09
SSH1-209ENST00000551165 GSX1Q9H4S2 264 aaPredicted RBP15.59■□□□□ 0.09
SSH1-209ENST00000551165 CRYGCP07315 174 aa15.58■□□□□ 0.09
SSH1-209ENST00000551165 BCL2P10415 239 aa15.58■□□□□ 0.09
SSH1-209ENST00000551165 CTRB1P17538 263 aa15.58■□□□□ 0.09
SSH1-209ENST00000551165 BRS3P32247 399 aa15.58■□□□□ 0.09
SSH1-209ENST00000551165 NPBWR1P48145 328 aa15.58■□□□□ 0.09
SSH1-209ENST00000551165 CTRB2Q6GPI1 263 aa15.58■□□□□ 0.09
SSH1-209ENST00000551165 ZNF562Q6V9R5 426 aa15.58■□□□□ 0.09
SSH1-209ENST00000551165 TMEM219Q86XT9 240 aa15.58■□□□□ 0.09
SSH1-209ENST00000551165 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.58■□□□□ 0.09
SSH1-209ENST00000551165 PIFOQ8TCI5 191 aa15.58■□□□□ 0.09
SSH1-209ENST00000551165 HSPB9Q9BQS6 159 aa15.58■□□□□ 0.09
SSH1-209ENST00000551165 ZNF469Q96JG9 3925 aaPredicted RBP15.58■□□□□ 0.08
SSH1-209ENST00000551165 MT-CO2P00403 227 aa15.58■□□□□ 0.08
SSH1-209ENST00000551165 MRPL41Q8IXM3 137 aaKnown RBP15.58■□□□□ 0.08
SSH1-209ENST00000551165 IGHV7-81A0A0B4J1V7 117 aa15.57■□□□□ 0.08
SSH1-209ENST00000551165 A0A1W2PPV4 95 aa15.57■□□□□ 0.08
SSH1-209ENST00000551165 CYB561D1Q8N8Q1 229 aa15.57■□□□□ 0.08
SSH1-209ENST00000551165 ARPC1AQ92747 370 aa15.57■□□□□ 0.08
SSH1-209ENST00000551165 NUPL2O15504 423 aaKnown RBP15.57■□□□□ 0.08
SSH1-209ENST00000551165 EGR2P11161 476 aaPredicted RBP15.57■□□□□ 0.08
SSH1-209ENST00000551165 SVBPQ8N300 66 aa15.57■□□□□ 0.08
SSH1-209ENST00000551165 CSPG4Q6UVK1 2322 aa15.57■□□□□ 0.08
SSH1-209ENST00000551165 Q5PR19 223 aa15.56■□□□□ 0.08
SSH1-209ENST00000551165 CYP2G1PQ6ZSU1 146 aa15.56■□□□□ 0.08
SSH1-209ENST00000551165 NKX6-2Q9C056 277 aaPredicted RBP15.56■□□□□ 0.08
SSH1-209ENST00000551165 KHDC3LQ587J8 217 aa15.56■□□□□ 0.08
SSH1-209ENST00000551165 BEX4Q9NWD9 120 aaPredicted RBP15.56■□□□□ 0.08
SSH1-209ENST00000551165 LINC01548A6NM66 108 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 I3L2K1 104 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 ARL14EPLP0DKL9 152 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 MIR17HGQ75NE6 70 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 LINC01356Q8N9X3 169 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 TMEM37Q8WXS4 190 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 KCNIP2Q9NS61 270 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 CR1P17927 2039 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 FAM74A7A6NL05 159 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 HSPB1P04792 205 aaKnown RBP15.55■□□□□ 0.08
SSH1-209ENST00000551165 FAM74A3Q4VXF1 159 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 KRTAP1-3Q8IUG1 177 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 THAP8Q8NA92 274 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 DOK5Q9P104 306 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 S4R3C0 116 aa15.55■□□□□ 0.08
SSH1-209ENST00000551165 TRAV20A0A0B4J274 112 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 SOX15O60248 233 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 FAM78BQ5VT40 261 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 SLC35E3Q7Z769 313 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 SRSF8Q9BRL6 282 aaKnown RBP15.54■□□□□ 0.08
SSH1-209ENST00000551165 C20orf24Q9BUV8 137 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 GCN1Q92616 2671 aaKnown RBP15.54■□□□□ 0.08
SSH1-209ENST00000551165 TGFAP01135 160 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 STAG3L2P0CL84 134 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 STAG3L3P0CL85 134 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 CD81P60033 236 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 MORN5Q5VZ52 161 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 OR5T1Q8NG75 326 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 SMDT1Q9H4I9 107 aa15.54■□□□□ 0.08
SSH1-209ENST00000551165 TCRBV4S1A1TA0A5B7 111 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 K7EIM0 57 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 PAGE4O60829 102 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 AKIRIN2Q53H80 203 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 SOHLH1Q5JUK2 328 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 TMEM116Q8NCL8 245 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 RASL11BQ9BPW5 248 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 C1RLQ9NZP8 487 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 VAX2Q9UIW0 290 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 PSMB11A5LHX3 300 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 AKR1C3P42330 323 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 UBE2G2P60604 165 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 ETFRF1Q6IPR1 90 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 TMEM88Q6PEY1 159 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 SPNS3Q6ZMD2 512 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 CLRN3Q8NCR9 226 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 FANCD2OSQ96PS1 177 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 SSX3Q99909 188 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 MEGF9Q9H1U4 602 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 TNFRSF19Q9NS68 423 aa15.53■□□□□ 0.08
SSH1-209ENST00000551165 MDFIC2A0A1B0GVS7 189 aa15.52■□□□□ 0.08
SSH1-209ENST00000551165 RHOBP62745 196 aa15.52■□□□□ 0.08
SSH1-209ENST00000551165 Q96MF0 132 aa15.52■□□□□ 0.08
SSH1-209ENST00000551165 PRRC2AP48634 2157 aaKnown RBP15.52■□□□□ 0.07
SSH1-209ENST00000551165 DNASE2O00115 360 aaPredicted RBP15.51■□□□□ 0.07
SSH1-209ENST00000551165 CORTO00230 105 aa15.51■□□□□ 0.07
SSH1-209ENST00000551165 HLA-DRB1P01911 266 aa15.51■□□□□ 0.07
SSH1-209ENST00000551165 LOXL1Q08397 574 aaPredicted RBP15.51■□□□□ 0.07
SSH1-209ENST00000551165 PMS2P11Q13670 270 aa15.51■□□□□ 0.07
SSH1-209ENST00000551165 KIAA0141Q14154 515 aaPredicted RBP15.51■□□□□ 0.07
SSH1-209ENST00000551165 PATE2Q6UY27 113 aa15.51■□□□□ 0.07
SSH1-209ENST00000551165 C22orf15Q8WYQ4 148 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms