RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 NUPL2O15504 423 aaKnown RBP9.65□□□□□ -0.86
NPAS3-209ENST00000551008 B3GALNT1O75752 331 aa9.65□□□□□ -0.86
NPAS3-209ENST00000551008 TMEM50AO95807 157 aa9.65□□□□□ -0.86
NPAS3-209ENST00000551008 IFNA17P01571 189 aa9.65□□□□□ -0.86
NPAS3-209ENST00000551008 KLF9Q13886 244 aaPredicted RBP9.65□□□□□ -0.86
NPAS3-209ENST00000551008 TMEM187Q14656 261 aa9.65□□□□□ -0.86
NPAS3-209ENST00000551008 ZNF79Q15937 498 aa9.65□□□□□ -0.86
NPAS3-209ENST00000551008 ZNF124Q15973 351 aa9.65□□□□□ -0.86
NPAS3-209ENST00000551008 ANKRD55Q3KP44 614 aa9.65□□□□□ -0.86
NPAS3-209ENST00000551008 TOMM20LQ6UXN7 152 aa9.65□□□□□ -0.86
NPAS3-209ENST00000551008 MCFD2Q8NI22 146 aa9.65□□□□□ -0.86
NPAS3-209ENST00000551008 CACNG5Q9UF02 275 aa9.65□□□□□ -0.86
NPAS3-209ENST00000551008 C14orf166Q9Y224 244 aaKnown RBP9.65□□□□□ -0.86
NPAS3-209ENST00000551008 TMEM56-RWDD3S4R434 201 aa9.65□□□□□ -0.86
NPAS3-209ENST00000551008 LOC102724200A0A096LPH7 203 aaPredicted RBP9.64□□□□□ -0.87
NPAS3-209ENST00000551008 GNG7O60262 68 aa9.64□□□□□ -0.87
NPAS3-209ENST00000551008 HOXA1P49639 335 aaPredicted RBP9.64□□□□□ -0.87
NPAS3-209ENST00000551008 EWSR1Q01844 656 aaKnown RBP eCLIP9.64□□□□□ -0.87
NPAS3-209ENST00000551008 RELQ04864 619 aaPredicted RBP9.64□□□□□ -0.87
NPAS3-209ENST00000551008 TMEM268Q5VZI3 342 aa9.64□□□□□ -0.87
NPAS3-209ENST00000551008 TMEM116Q8NCL8 245 aa9.64□□□□□ -0.87
NPAS3-209ENST00000551008 RRNAD1Q96FB5 475 aaKnown RBP9.64□□□□□ -0.87
NPAS3-209ENST00000551008 GALNT14Q96FL9 552 aa9.64□□□□□ -0.87
NPAS3-209ENST00000551008 PRRT1Q99946 306 aa9.64□□□□□ -0.87
NPAS3-209ENST00000551008 VSIRQ9H7M9 311 aa9.64□□□□□ -0.87
NPAS3-209ENST00000551008 RABL2AQ9UBK7 228 aaPredicted RBP9.64□□□□□ -0.87
NPAS3-209ENST00000551008 RABL2BQ9UNT1 228 aa9.64□□□□□ -0.87
NPAS3-209ENST00000551008 LCE6AA0A183 80 aa9.63□□□□□ -0.87
NPAS3-209ENST00000551008 ATG12O94817 140 aa9.63□□□□□ -0.87
NPAS3-209ENST00000551008 IGKV1-17P01599 117 aa9.63□□□□□ -0.87
NPAS3-209ENST00000551008 SPCS3P61009 180 aa9.63□□□□□ -0.87
NPAS3-209ENST00000551008 DHODHQ02127 395 aa9.63□□□□□ -0.87
NPAS3-209ENST00000551008 NMSQ5H8A3 153 aa9.63□□□□□ -0.87
NPAS3-209ENST00000551008 FAM219AQ8IW50 185 aa9.63□□□□□ -0.87
NPAS3-209ENST00000551008 OR52E5Q8NH55 327 aa9.63□□□□□ -0.87
NPAS3-209ENST00000551008 ST8SIA2Q92186 375 aa9.63□□□□□ -0.87
NPAS3-209ENST00000551008 RSL24D1Q9UHA3 163 aaKnown RBP9.63□□□□□ -0.87
NPAS3-209ENST00000551008 PUS1Q9Y606 427 aaKnown RBP eCLIP9.63□□□□□ -0.87
NPAS3-209ENST00000551008 FABP12A6NFH5 140 aa9.62□□□□□ -0.87
NPAS3-209ENST00000551008 YIF1AO95070 293 aa9.62□□□□□ -0.87
NPAS3-209ENST00000551008 NXPH3O95157 252 aa9.62□□□□□ -0.87
NPAS3-209ENST00000551008 SNCAP37840 140 aa9.62□□□□□ -0.87
NPAS3-209ENST00000551008 ZNF600Q6ZNG1 722 aa9.62□□□□□ -0.87
NPAS3-209ENST00000551008 APRG1Q8IVJ8 170 aa9.62□□□□□ -0.87
NPAS3-209ENST00000551008 FAM24BQ8N5W8 94 aa9.62□□□□□ -0.87
NPAS3-209ENST00000551008 DUSP18Q8NEJ0 188 aa9.62□□□□□ -0.87
NPAS3-209ENST00000551008 OR4X1Q8NH49 305 aa9.62□□□□□ -0.87
NPAS3-209ENST00000551008 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.62□□□□□ -0.87
NPAS3-209ENST00000551008 IGKV3-7A0A075B6H7 116 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 TRAV14DV4A0A0A6YYC5 116 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 IGHV3-66A0A0C4DH42 116 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 OR4C46A6NHA9 309 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 CORTO00230 105 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 CLN5O75503 358 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 NPBWR1P48145 328 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 C2orf83Q53S99 150 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 LAMTOR1Q6IAA8 161 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 CCDC190Q86UF4 302 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 RNASE11Q8TAA1 199 aaKnown RBP9.61□□□□□ -0.87
NPAS3-209ENST00000551008 IL22RA2Q969J5 263 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 PDCD10Q9BUL8 212 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 MAP6D1Q9H9H5 199 aa9.61□□□□□ -0.87
NPAS3-209ENST00000551008 HYDINQ4G0P3 5121 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 NOL3O60936 208 aaKnown RBP9.6□□□□□ -0.87
NPAS3-209ENST00000551008 IGLC1P0CG04 106 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 RPL35AP18077 110 aaKnown RBP9.6□□□□□ -0.87
NPAS3-209ENST00000551008 OPRK1P41145 380 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 TFPI2P48307 235 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 DEFB135Q30KP9 77 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 TIGITQ495A1 244 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 PRSS54Q6PEW0 395 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 TCF24Q7RTU0 167 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 LYZL2Q7Z4W2 148 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 WFDC3Q8IUB2 231 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 GBGT1Q8N5D6 347 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 MCUBQ9NWR8 336 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 SCP2D1Q9UJQ7 156 aa9.6□□□□□ -0.87
NPAS3-209ENST00000551008 DFFBO76075 338 aa9.59□□□□□ -0.87
NPAS3-209ENST00000551008 AKR1C4P17516 323 aa9.59□□□□□ -0.87
NPAS3-209ENST00000551008 HTR2BP41595 481 aa9.59□□□□□ -0.87
NPAS3-209ENST00000551008 SUB1P53999 127 aaKnown RBP eCLIP9.59□□□□□ -0.87
NPAS3-209ENST00000551008 TNFRSF9Q07011 255 aa9.59□□□□□ -0.87
NPAS3-209ENST00000551008 Q6ZWC4 215 aa9.59□□□□□ -0.87
NPAS3-209ENST00000551008 SLC24A4Q8NFF2 622 aa9.59□□□□□ -0.87
NPAS3-209ENST00000551008 GINS3Q9BRX5 216 aa9.59□□□□□ -0.87
NPAS3-209ENST00000551008 ENY2Q9NPA8 101 aa9.59□□□□□ -0.87
NPAS3-209ENST00000551008 HEYLQ9NQ87 328 aaPredicted RBP9.59□□□□□ -0.87
NPAS3-209ENST00000551008 HSPB7Q9UBY9 170 aa9.59□□□□□ -0.87
NPAS3-209ENST00000551008 U3KQE9 123 aa9.59□□□□□ -0.87
NPAS3-209ENST00000551008 A0A0B4J2A0 478 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 KIR2DL5BA0A0G2JN68 375 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 KIR2DL5BA0A0G2JPC4 375 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 PITX3O75364 302 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 SULT1A3P0DMM9 295 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 SULT1A4P0DMN0 295 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 CRYBB3P26998 211 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 RND2P52198 227 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 C4orf48Q5BLP8 95 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 KIR2DL5AQ8N109 375 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 KIR2DL5BQ8NHK3 375 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms